Kinetic model for incubation Version 1
Simulate Model on JWSGlycolytic model for Plasmodium falciparum; closed system
SEEK ID: https://testing.sysmo-db.org/models/98?version=1
3 items are associated with this Model:-
penkler2.dat (uuencoded file - 11.6 KB)
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penkler2.nb (Mathematica Notebook file - 1.06 MB)
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penkler2.sedx (Zip file - 127 KB)
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Model type: Not specified
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Creators and Submitter
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Created: 10th Jul 2015 at 14:23
Last updated: 10th Jul 2015 at 14:29
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Version 1 (earliest) Created 10th Jul 2015 at 14:23 by Stuart Owen
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Projects: SysMO DB, BaCell-SysMO, SulfoSys, SysMOLAB, <script>alert('xss-project-title')</script> & Test Project, Refinery NDD, Gatekeeper Testing Project, Hadas' project for Stuart, SilicoTryp, Gatekeeper test, Dummy project, Taverna Project, testing assigning organisms, Xiaoming Test, test, flora test project (2)
Institutions: HITS gGmbH, DSM Nutritional Products Ltd., Manchester Centre for Integrative Systems Biology, University of Manchester, <script>alert('xss-institution-title')</script> & Test Institution, School of Computer Science, University of Manchester, Universitat Autònoma de Barcelona, Helmholtz Centre for Infection Research, Department of Computer Science, ETH Zurich
https://orcid.org/0000-0003-2130-0865
The Senior Research Software Engineer on SysMO-DB team.
Developing and testing SysMO SEEK, WorkflowHub and RightField.
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The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
- maximises the ‘shelf life’ and utility of data generated by SysMO;
- provides an integrated platform for the dissemination ...
Programme: Dummy programme
Public web page: http://www.sysmo-db.org/
The investigation entails the construction and validation of a detailed mathematical model for glycolysis of the malaria parasite Plasmodium falciparum in the blood stage trophozoite form.
This Investigation was performed by SySMO DB team together with PALS in order to crete methods and best practices for capturing experimental data.
Submitter: Olga Krebs
Studies: Metabolomics data capture
Assays: Excel template for metabolomics data, GLC incubation
This study includes the experimental data for model validation and the model predictions of that data set.
Submitter: Stuart Owen
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Assays: GLC incubation
Submitter: Olga Krebs
Investigation: Methods for interrelating 'omics data
Assays: Excel template for metabolomics data, GLC incubation
Submitter: Stuart Owen
Biological problem addressed: Metabolism
Investigation: Glucose metabolism in Plasmodium falciparum tro...
Study: Model validation
Submitter: Quyen Yamanaka
Biological problem addressed: Metabolism
Investigation: Methods for interrelating 'omics data
Study: Metabolomics data capture
