Programme: This Project is not associated with a Programme
SEEK ID: https://testing.sysmo-db.org/projects/14
Public web page: Not specified
Organisms: No Organisms specified
FAIRDOM PALs: No PALs for this Project
Project created: 25th Aug 2011
Related items
- People (3)
- Institutions (2)
- Investigations (1)
- Studies (1+2)
- Assays (1+1)
- Strains (1)
- Data files (1)
- Models (6)
- Publications (2)
- Events (1)
Projects: SilicoTryp
Institutions: University of Heidelberg
Projects: SysMO DB, BaCell-SysMO, SulfoSys, SysMOLAB, <script>alert('xss-project-title')</script> & Test Project, Refinery NDD, Gatekeeper Testing Project, Hadas' project for Stuart, SilicoTryp, Gatekeeper test, Dummy project, Taverna Project, testing assigning organisms, Xiaoming Test, test, flora test project (2)
Institutions: HITS gGmbH, DSM Nutritional Products Ltd., Manchester Centre for Integrative Systems Biology, University of Manchester, <script>alert('xss-institution-title')</script> & Test Institution, School of Computer Science, University of Manchester, Autonomous University of Barcelona, Helmholtz Centre for Infection Research Braunscheig, ETH Zurich
https://orcid.org/0000-0003-2130-0865Expertise: talking, walking, Data Management, Software Engineering, Software Architecture, Repositories, Microbiology, fishing, Proteomics
Tools: mouth, legs, Databases, Java, Workflows, Web services, Taverna, Ruby, Ruby on Rails, linux, J2EE, Microarray analysis, SBML
The Senior Research Software Engineer on SysMO-DB team.
Developing and testing SysMO SEEK, WorkflowHub and RightField.
Projects: SysMO DB, SysMOLAB, SilicoTryp, maggy's project
Institutions: HITS gGmbH, University of Heidelberg, Somewhere Else
Expertise: Bioinformatics
Tools: Ruby on Rails
Snapshots: Snapshot 1
Snapshots: No snapshots
Submitter: Quyen Yamanaka
Assay type: Flux Balance Analysis
Technology type: 2-hybrid System
Investigation: test investigation
Study: 1 hidden item
Organisms: Bacillus subtilis, Clostridium acetobutylicum : ATCC824 (wild-type / wild-type), Bacillus subtilis : 168a (del ase / wild-type)
SOPs: No SOPs
Data files: No Data files
Snapshots: No snapshots
Submitter: Stuart Owen
Provider Name: Not specified
Provider's strain ID: Not specified
Organism: Escherichia coli
Genotypes: wild-type
Phenotypes: wild-type
Comment: Not specified
Creator: Quyen Yamanaka
Submitter: Quyen Yamanaka
Creator: Quyen Yamanaka
Submitter: Quyen Yamanaka
Model type: Partial differential equations (PDE)
Model format: SBML
Environment: JWS Online
Organism: Not specified
Investigations: Glycolitic Flux in Lactococcus lactis
Studies: 1 hidden item
Assays: example assay
Creators: None
Submitter: Deleted submitter
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creators: None
Submitter: Deleted submitter
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creator: Quyen Yamanaka
Submitter: Abeer Cherry
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creator: Abeer Cherry
Submitter: Abeer Cherry
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
The behaviour of biological systems can be deduced from their mathematical models. However, multiple sources of data in diverse forms are required in the construction of a model in order to define its components and their biochemical reactions, and corresponding parameters. Automating the assembly and use of systems biology models is dependent upon data integration processes involving the interoperation of data and analytical resources.
Originating from BioModels: ...
Creator: Abeer Cherry
Submitter: Abeer Cherry
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Abstract (Expand)
Authors: Andreas Petzold, Kathrin Reichwald, Marco Groth, Stefan Taudien, Nils Hartmann, Steffen Priebe, Dmitry Shagin, Christoph Englert, Matthias Platzer
Date Published: 16th Mar 2013
Publication Type: Not specified
PubMed ID: 23496936
Citation:
Abstract
Authors: A. Schroder, J. Wollnik, C. Wrzodek, A. Drager, M. Bonin, O. Burk, M. Thomas, W. E. Thasler, U. M. Zanger, A. Zell
Date Published: 14th Jul 2011
Publication Type: Not specified
DOI: 10.1093/bioinformatics/btr416
Citation:
Start Date: 16th Aug 2012
End Date: Not specified
Event Website: Not specified
Country: Afghanistan
City: Not specified