SEEK ID: https://testing.sysmo-db.org/assays/15
Modelling analysis
Projects: SysMO DB
Investigation: Glycolitic Flux in Lactococcus lactis
Study: hidden item
Assay position:
Biological problem addressed: Model Analysis Type
Organisms: No organisms
- A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.
- Lin3
- tset model
- showing attribution
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Views: 2162
Created: 26th Aug 2011 at 11:53
Last updated: 22nd Jan 2022 at 05:19
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- People (1)
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- Projects (1)
- Investigations (1)
- Studies (0+1)
- Data files (3)
- Models (4)
- SOPs (1)
- Publications (1)
Projects: SysMO DB, SysMOLAB, SilicoTryp, maggy's project
Institutions: HITS gGmbH, University of Heidelberg, Somewhere Else
Expertise: Bioinformatics
Tools: Ruby on Rails
The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
- maximises the ‘shelf life’ and utility of data generated by SysMO;
- provides an integrated platform for the dissemination ...
Programme: Dummy programme
Public web page: http://www.sysmo-db.org/
Organisms: Lactic Acid Bacteria, Agapornis
An investigation into the control mechanisms of glycolytic flux in Lactococcus lactis.
This investigation represents the data and models published by Hoefnagel et al in JWS Online and in M.H.N. Hoefnagel, J. Hugenholtz and J.L. SnoepMol. Biol. Reports 29, 157-161 (2002)
Submitter: Jacky Snoep
Studies: The effects of Redox Charge on Glycolytic Flux
Assays: Time dependent responses of glycolytic intermediates in a detailed glyco..., example assay
Snapshots: No snapshots
link to google doc
Creators: Stuart Owen, baby boy, what is this?????????????
Submitter: Olga Krebs
Relationship type: Not specified
Creator: Stuart Owen
Submitter: Stuart Owen
Model type: Not specified
Model format: SBML
Environment: Not specified
Organism: Not specified
Investigations: Glycolitic Flux in Lactococcus lactis
Studies: 1 hidden item
Assays: example assay
Creator: Quyen Yamanaka
Submitter: Quyen Yamanaka
Model type: Partial differential equations (PDE)
Model format: SBML
Environment: JWS Online
Organism: Not specified
Investigations: Glycolitic Flux in Lactococcus lactis
Studies: 1 hidden item
Assays: example assay
Genomic data allow the large-scale manual or semi-automated assembly of metabolic network reconstructions, which provide highly curated organism-specific knowledge bases. Although several genome-scale network reconstructions describe Saccharomyces cerevisiae metabolism, they differ in scope and content, and use different terminologies to describe the same chemical entities. This makes comparisons between them difficult and underscores the desirability of a consolidated metabolic network that ...
Creator: Quyen Yamanaka
Submitter: Quyen Yamanaka
Model type: Not specified
Model format: SBML
Environment: Not specified
Organism: Not specified
Investigations: Glycolitic Flux in Lactococcus lactis
Studies: 1 hidden item
Assays: example assay
Creator: Franco Boudrot
Submitter: Franco Boudrot
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: An example Investigation with Scale, Glycolitic Flux in Lactococcus lactis
Studies: a test study and 1 hidden item
Assays: Modelling Assay with a SOP, example assay
Creator: Quyen Yamanaka
Submitter: Quyen Yamanaka
Investigations: Glycolitic Flux in Lactococcus lactis, I1
Studies: Study and 1 hidden item
Assays: Assay 1, example assay
Abstract
Authors: Martin Golebiewski, Martin Golebiewski
Date Published: 7th Oct 2011
Publication Type: Not specified
Citation: