Results of transcriptional profile in saccharomyces cerevisiae under different experimental conditions
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Created: 16th Oct 2009 at 13:25
Last updated: 16th Apr 2013 at 10:09
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Version 1 (earliest) Created 16th Oct 2009 at 13:25 by Katy Wolstencroft
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Projects: SysMO DB, Virtual Liver Network Developers
Institutions: School of Computer Science, University of Manchester, HITS gGmbH
Expertise: Biochemistry, Bioinformatics, Data Management
Tools: Data Management, Transcriptomics, Databases, Workflows, Web services, Taverna, Ontologies
I am a Research Fellow at the University of Manchester, working in Bioinformatics and Computer Science. I am also a guest researcher at the Vrije Universiteit.My research interests include scientific workflows, semantic discovery, and applying ontology technologies to biological data
The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
- maximises the ‘shelf life’ and utility of data generated by SysMO;
- provides an integrated platform for the dissemination ...
Programme: Dummy programme
Public web page: http://www.sysmo-db.org/
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This Investigation was performed by SySMO DB team together with PALS in order to crete methods and best practices for capturing experimental data.
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Cell growth underlies many key cellular and developmental processes, yet a limited number of studies have been carried out on cell-growth regulation. Comprehensive studies at the transcriptional, proteomic and metabolic levels under defined controlled conditions are currently lacking.
This investigation shows public data taken from the BioInvestigation Index. (http://www.ebi.ac.uk/bioinvindex/study.seam?studyId=BII-S-1) Organism: Saccharomyces Cerevisiae
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Dear SEEK users, this Assay is just an example Excell sheet for intracellular metabolites concentration measurements performed using cell culture growing in chemostat
.
Submitter: Olga Krebs
Assay type: Amplification
Technology type: Mass Spectrometry
Investigation: Methods for interrelating 'omics data
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SOPs: new sop
Data files: Excell sheet template : concentrations of intra..., Treatments Test 1, Umlaut in sheet names from Excel, Umlaut only in cells, a_transcriptome from BII-S-1, test plot data
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Assay to measure gene expression of yeast saccharomyces cerevisiae under different nutrient limitations
Limiting Nutrients: ethanol, nitrogen, glucose, phosphorus, carbon, sulfur, sulphur
This data is public data taken from the BioInvestigation Index.
(http://www.ebi.ac.uk/bioinvindex/study.seam?studyId=BII-S-1)
Submitter: Katy Wolstencroft
Assay type: Transcriptional Profiling
Technology type: Microarray
Investigation: Growth control of the eukaryote cell: a systems...
Study: 1 hidden item
Organisms: Callimico goeldii
SOPs: COGEME_extraction_mod-chemostat_v1
Data files: a_transcriptome from BII-S-1
Snapshots: No snapshots