SEEK ID: https://testing.sysmo-db.org/assays/29
Modelling analysis
Projects: SysMO DB
Investigation: inv1
Study: hidden item
Assay position:
Biological problem addressed: Model Analysis Type
Organisms: No organisms
Data:
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Views: 958
Created: 18th Apr 2012 at 09:29
Last updated: 26th Sep 2017 at 10:54
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- People (1)
- Programmes (1)
- Projects (1)
- Investigations (1)
- Studies (0+1)
- Data files (2)
- Models (2)
- SOPs (1)
Projects: SysMO DB, BaCell-SysMO, SulfoSys, SysMOLAB, <script>alert('xss-project-title')</script> & Test Project, Refinery NDD, Gatekeeper Testing Project, Hadas' project for Stuart, SilicoTryp, Gatekeeper test, Dummy project, Taverna Project, testing assigning organisms, Xiaoming Test, test, flora test project (2)
Institutions: HITS gGmbH, DSM Nutritional Products Ltd., Manchester Centre for Integrative Systems Biology, University of Manchester, <script>alert('xss-institution-title')</script> & Test Institution, School of Computer Science, University of Manchester, Autonomous University of Barcelona, Helmholtz Centre for Infection Research Braunscheig, ETH Zurich
https://orcid.org/0000-0003-2130-0865Expertise: talking, walking, Data Management, Software Engineering, Software Architecture, Repositories, Microbiology, fishing, Proteomics
Tools: mouth, legs, Databases, Java, Workflows, Web services, Taverna, Ruby, Ruby on Rails, linux, J2EE, Microarray analysis, SBML
The Senior Research Software Engineer on SysMO-DB team.
Developing and testing SysMO SEEK, WorkflowHub and RightField.
The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
- maximises the ‘shelf life’ and utility of data generated by SysMO;
- provides an integrated platform for the dissemination ...
Programme: Dummy programme
Public web page: http://www.sysmo-db.org/
Organisms: Lactic Acid Bacteria, Agapornis
Submitter: Stuart Owen
Assays: Test Assay for Publishing, Testing assay for project browser thingy, demo modelling analysis, ttt
Snapshots: No snapshots
Results of transcriptional profile in Saccharomyces cerevisiae after rapamycin treatment
Investigations: An example Investigation with Scale, Growth control of the eukaryote cell: a systems..., inv1
Studies: A time course analysis of transcription respon..., a test study and 1 hidden item
Assays: Assay with a SOP, Time course analysis of transcription, demo modelling analysis
results of metabolic profiling of Saccharomyces cerevisiae in different conditions
Investigations: Growth control of the eukaryote cell: a systems..., inv1
Studies: 2 hidden items
Assays: Changes in flux on the metabolome, demo modelling analysis
Creator: Stuart Owen
Submitter: Stuart Owen
Model type: Not specified
Model format: SBML
Environment: Not specified
Potato model taken from JWS Online: http://jjj.mib.ac.uk/
Testing notification email
Creator: Stuart Owen
Submitter: Stuart Owen
Model type: Not specified
Model format: SBML
Environment: JWS Online
Organism: Not specified
Investigations: An example Investigation with Scale, inv1
Studies: a test study and 1 hidden item
Creator: Lihua Angel
Submitter: queeny Nguyen
Investigations: Methods for interrelating 'omics data, inv1 and 1 hidden item
Studies: Metabolomics data capture and 2 hidden items
Assays: Excel template for metabolomics data, demo modelling analysis and 1 hidden item