output/raw/AgroRNA dsRNA_ciscena_05-05-2016.txt Version 1
_p_RNAinVAL/_I_01_LabTrials/_S_02_dsRNAorder/_A_01_AgroRNA-wet/
SEEK ID: https://testing.sysmo-db.org/data_files/1969?version=1
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output/raw/AgroRNA dsRNA_ciscena_05-05-2016.txt
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Sample ID User ID Date Time ng/ul A260 A280 260/280 260/230 Constant Cursor Pos. Cursor abs. 340 raw egfp dsRNA 50x Default 5/5/2016 11:39 AM 100.11 2.002 0.838 2.39 2.63 50.00 230 0.760 0.000 vATPaseE dsRNA 50x Default 5/5/2016 11:41 AM 105.96 2.119 0.992 2.14 2.59 50.00 230 0.817 -0.015 alas dsRNA 50x Default 5/5/2016 11:42 AM 119.62 2.392 1.130 2.12 2.51 50.00 230 0.951 -0.016 JHBP-like dsRNA 50x Default 5/5/2016 11:43 AM 117.88 2.358 1.095 2.15 2.54 50.00 230 0.927 -0.018 mesh dsRNA 50x Default 5/5/2016 11:44 AM 112.33 2.247 1.063 2.11 2.57 50.00 230 0.873 -0.012
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Created: 11th Nov 2021 at 10:54
Last updated: 11th Nov 2021 at 10:54
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Version 1 (earliest) Created 11th Nov 2021 at 10:54 by Andrej Blejec
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Institutions: National Institute of Biology, NIB, <script>alert('xss-institution-title')</script> & Test Institution
https://orcid.org/0000-0001-7484-6031
Local data management; testing uploading/downloading using API
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Web page: Not specified
This is a demo project used for the demonstration of R package seekr functionality. R package seekr is based on SEEKR-API and enables batch upload of files organized in pISA-tree structure.
Programme: pISA-tree
Public web page: https://github.com/NIB-SI/seekr
Investigation: _I_01_LabTrials Short Name: 01_LabTrials Title: Laboratory trials Description: Selection of targets and their validation in trials performed in the laboratories and greenhouse at NIB Phenodata: ./phenodata_20210113.txt pISA Investigation creation date: 2021-01-13 pISA Investigation creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Studies: _S_01_TargetSelect, _S_02_dsRNAorder, _S_03_dsRNAprod, _S_04_Stages, _S_05_jun2016, _S_06_oct2016, _S_07_dec2016, _S_08_jan2017, _S_09_jun2017, _S_10_apr2018, _S_11_may2018
Assays: _A_00_dsRNA_stabil-wet, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01_AgroRNA-wet, _A_01_LitData-dry, _A_01_pIsol-wet, _A_02-RNAisol, _A_02-RNAisol, _A_02-RNAisol, _A_02_UlrichTop100-BLAST, _A_02_plasmid-SangerSeq, _A_02_qPCR_ampl_test-wet, _A_03-qPCR, _A_03-qPCR, _A_03_RNaseItreat-wet, _A_03_patentDB-BLAST, _A_03_stages-RNAisol, _A_04_ortho-BLAST, _A_04_stages-qPCR, _A_05_CPB_gene-annot, _A_08_SelTargetsA-dry
Study: _S_02_dsRNAorder Short Name: 02_dsRNAorder Title: Ordering the production of dsRNA of selected target genes Description: In-vitro production of dsRNAs designed to silence selected CPB genes Raw Data: pISA Study creation date: 2021-01-14 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Assay: _A_01_AgroRNA-wet Short Name: 01_AgroRNA-wet Assay Class: WET Assay Type: wet Title: Order dsRNA in-vitro synthesis at AgroRNA Description: Materials associated with the order of in-vitro synthesis of designed dsRNA, results of cleaning procedure and DNase I test to ensure the material is not DNA pISA Assay creation date: 2021-01-14 pISA Assay creator: Marko Petek Phenodata: None Featuredata: Data:
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials-test
Study: _S_02_dsRNAorder
