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Created: 16th Jul 2013 at 10:15
Last updated: 24th Jul 2013 at 09:43
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Version 2 (latest) Created 16th Jul 2013 at 10:18 by Quyen Yamanaka
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Projects: SysMO DB, SysMOLAB, SilicoTryp, maggy's project
Institutions: HITS gGmbH, University of Heidelberg, Somewhere Else
Expertise: Bioinformatics
Tools: Ruby on Rails
The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
- maximises the ‘shelf life’ and utility of data generated by SysMO;
- provides an integrated platform for the dissemination ...
Programme: Dummy programme
Public web page: http://www.sysmo-db.org/
Organisms: Lactic Acid Bacteria, Agapornis
Submitter: Stuart Owen
Studies: a test study, fffff
Assays: Assay with a SOP, Assay with one strain, Modelling Assay with a SOP, Patient tests, jyggiihhiuhiuhiuh, test publish, testing assay and techno types, testing flux balance, testing href in description, testing making an assay
Snapshots: No snapshots
Glycerol, a major by-product of ethanol fermentation by Saccharomyces cerevisiae, is of significant importance to the wine, beer, and ethanol production industries. This investigation aims to gain a clearer understanding of and to quantify the extent to which parameters of the pathway affect glycerol flux in S. cerevisiae.
This investigation represents the data and models submitted to JWS online by Cronwright et al (http://jjj.biochem.sun.ac.za/cgi-bin/getMoreInfo.py?modeldir=cronwright) and ...
Submitter: Katy Wolstencroft
Studies: Glycerol Synthesis Pathway
Assays: Extracellular Glycerol, Glycerol Synthesis Model construction, Intracellular Metabolites, fffff, test assay
Snapshots: No snapshots
Submitter: Stuart Owen
Investigation: An example Investigation with Scale
Assays: Assay with a SOP, Assay with one strain, Modelling Assay with a SOP, Patient tests, jyggiihhiuhiuhiuh, test publish, testing assay and techno types, testing flux balance, testing href in description, testing making an assay
Snapshots: No snapshots
This is a study of the glycerol synthesis pathway, using model predictions and experimental measurements
Submitter: Katy Wolstencroft
Investigation: Glycerol Synthesis in Saccharomyces cerevisiae
Assays: Extracellular Glycerol, Glycerol Synthesis Model construction, Intracellular Metabolites, test assay
Snapshots: No snapshots
A kinetic model of the glycerol synthesis pathway has been constructed. Kinetic parameters were collected from published values. Maximal enzyme activities and intracellular effector concentrations were determined experimentally.
Submitter: Katy Wolstencroft
Biological problem addressed: Metabolism
Investigation: Glycerol Synthesis in Saccharomyces cerevisiae
Study: Glycerol Synthesis Pathway
Organisms: Callimico goeldii
Models: Metabolic Control Analysis of Glycerol Synthesi...
SOPs: No SOPs
Data files: Cronwright Parameter Data, SysMO template
Snapshots: No snapshots
Submitter: Stuart Owen
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: An example Investigation with Scale
Study: a test study
Organisms: No organisms
SOPs: Quyen's sop
Data files: SysMO template, a_microarray from BII-S-2, dummy 2 and 1 hidden item
Snapshots: No snapshots