Sample types
What is a Sample type?Filters
for checking the api restrictions
title (String) *, a number (Real number) , an integer (Integer) , boolean (Boolean)
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one attribute (String) *
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s (String) *
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Parent samples (Registered Sample List) , New sample (Text) *, date time (Date time) *, registered data file (Registered Data file) , URI (URI) , weblink (Web link) , ontology (Controlled Vocabulary - ontology term) , assay kit (Controlled Vocabulary - fhjbjk)
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Source Name (String) *, organism (Controlled Vocabulary - organism (free text allowed)) *, organism part (Controlled Vocabulary - organism part (free text allowed)) *, developmental stage (Controlled Vocabulary - developmental stage (free text allowed)) *, age (Controlled Vocabulary - age (free text allowed)) *, genotype (Controlled Vocabulary - genotype (free text allowed)) *, cultivar (String) *, material type (Controlled Vocabulary - material type (free text allowed)) *
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Input (Source Name) (Registered Sample List) *, sample collection (String) *, sampling site (String) , Sample Name (String) *, material type (Controlled Vocabulary - material type (free text allowed)) *
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name (String) *, a_sample (Registered Sample - color sample) , a_datafile (Registered Data file) , a_strain (Registered Strain)
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title (String) *, attr_1 (String) , attr_2 (String) , attr_3 (String) , attr_4 (String) , attr_5 (String) , attr_6 (String) , attr_7 (String) , attr_8 (String) , attr_9 (String)
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id (String) *, df (Registered Data file) *
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What does it link to if it is linking to itself? can it link the same sample it is creating? Probably not.
New name for the self linked sample (String) *, The old sample (Registered Sample List) , Color (String)
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This Sample Type has one Attribute able to make references to samples that are already registered in SEEK
New name (String) *, Old sample name (Registered Sample List)
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Name (String) *, wrong name (Registered Sample List)
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This Sample Type has descriptions in its Attributes! It is a wonderful way to inform what each Attribute is about
First attribute (String) *, Second (String) *, with a ontology (String) , with ontology and descript (String) , Ontology with ontology value (Controlled Vocabulary - NCIT Epidemiological Factors) ( mL )
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to test new fearures in SEEK version 1.12.0 this sampletype for Cell Culture description
sample_ID (String) *, Lab sample ID (String) *, parent sample (Registered Sample - OlgasTestType) , Age at sampling (Integer) ( wk ) , Starting date (Date time) *, Gender (Controlled Vocabulary - Gender) *, SOP used for culturing (Web link)
CAPITAL KEY (String) *
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Sample_ID (String) *, Organism (NCBI ID) , Variant ID (String) *, vf (Integer) , Location (String) , Chr: bp (String) , vf_allele (Controlled Vocabulary - Nucleotides) , Alleles (String)
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longer ontology NCIT (Controlled Vocabulary - longer ontology) *
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Ontology att (Controlled Vocabulary - Title of my ontology) *
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input (Registered Sample - Sample_testing_with_fruits) *, characteristics (String) , output (String) *, input2 (Registered Sample - test001)
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Sample number (String) , biome (Controlled Vocabulary - Biome from ENVO) *, Collection date (Date) , List of fruits (Controlled Vocabulary - List of fruits)
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ID (Integer) *, curation status spec (Controlled Vocabulary - Dummy1)
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RGB (String) *, color name (String) *, HEX (String) *
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Month (String) ( mo ) *, Sunny Days (Integer) ( d ) , Happy Days (Integer) ( d )
Colour (String) *, Container size (Integer) ( mL ) *
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title (String) *, shape (String) , flavor (String) , energy (Real number)
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