test file from e-science rightfield rdf example
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Created: 12th Jul 2012 at 09:17
Last updated: 26th Jun 2015 at 10:27
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Version 1 (earliest) Created 12th Jul 2012 at 09:17 by Stuart Owen
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Projects: SysMO DB, BaCell-SysMO, SulfoSys, SysMOLAB, <script>alert('xss-project-title')</script> & Test Project, Refinery NDD, Gatekeeper Testing Project, Hadas' project for Stuart, SilicoTryp, Gatekeeper test, Dummy project, Taverna Project, testing assigning organisms, Xiaoming Test, test, flora test project (2)
Institutions: HITS gGmbH, DSM Nutritional Products Ltd., Manchester Centre for Integrative Systems Biology, University of Manchester, <script>alert('xss-institution-title')</script> & Test Institution, School of Computer Science, University of Manchester, Autonomous University of Barcelona, Helmholtz Centre for Infection Research Braunscheig, ETH Zurich
https://orcid.org/0000-0003-2130-0865Expertise: talking, walking, Data Management, Software Engineering, Software Architecture, Repositories, Microbiology, fishing, Proteomics
Tools: mouth, legs, Databases, Java, Workflows, Web services, Taverna, Ruby, Ruby on Rails, linux, J2EE, Microarray analysis, SBML
The Senior Research Software Engineer on SysMO-DB team.
Developing and testing SysMO SEEK, WorkflowHub and RightField.
The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
- maximises the ‘shelf life’ and utility of data generated by SysMO;
- provides an integrated platform for the dissemination ...
Programme: Dummy programme
Public web page: http://www.sysmo-db.org/
Organisms: Lactic Acid Bacteria, Agapornis
Cell growth underlies many key cellular and developmental processes, yet a limited number of studies have been carried out on cell-growth regulation. Comprehensive studies at the transcriptional, proteomic and metabolic levels under defined controlled conditions are currently lacking.
This investigation shows public data taken from the BioInvestigation Index. (http://www.ebi.ac.uk/bioinvindex/study.seam?studyId=BII-S-1) Organism: Saccharomyces Cerevisiae
Submitter: Katy Wolstencroft
Studies: A time course analysis of transcription response in yeast treated with ..., Can yeast glycolysis be understood in terms of in vitro kinetics of the ..., test study
Assays: Changes in flux on the metabolome, Changes in flux on the proteome, Changes in flux on the transcriptome, Glycolysis in Saccharomyces cerevisiae, Time course analysis of transcription, Transcriptional profiling, new assay from data file, test assay, test for biol problem
Snapshots: No snapshots
Glycerol, a major by-product of ethanol fermentation by Saccharomyces cerevisiae, is of significant importance to the wine, beer, and ethanol production industries. This investigation aims to gain a clearer understanding of and to quantify the extent to which parameters of the pathway affect glycerol flux in S. cerevisiae.
This investigation represents the data and models submitted to JWS online by Cronwright et al (http://jjj.biochem.sun.ac.za/cgi-bin/getMoreInfo.py?modeldir=cronwright) and ...
Submitter: Katy Wolstencroft
Studies: Glycerol Synthesis Pathway
Assays: Extracellular Glycerol, Glycerol Synthesis Model construction, Intracellular Metabolites, fffff, test assay
Snapshots: No snapshots
Submitter: Quyen Yamanaka
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Glycerol Synthesis in Saccharomyces cerevisiae
Study: 1 hidden item
Organisms: Bacillus subtilis : NCIB3610 (wild-type / wild-type)
SOPs: No SOPs
Data files: Lactis 6, Treatments Test 1
Snapshots: No snapshots
Submitter: Quyen Yamanaka
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Growth control of the eukaryote cell: a systems...
Study: 1 hidden item
Organisms: Lactic Acid Bacteria : lactic test (wild-type / wild-type)
SOPs: No SOPs
Data files: Lactis 6, Quyen data, smashies
Snapshots: No snapshots