output/Tctop100cds__CPB_genome_nucl.tsv Version 1
_p_RNAinVAL/_I_01_LabTrials/_S_01_TargetSelect/_A_02_UlrichTop100-BLAST/
SEEK ID: https://testing.sysmo-db.org/data_files/1798?version=1
Filename:
output/Tctop100cds__CPB_genome_nucl.tsv
Format: Plain text document
Size: 13.4 KB
Query_ID Query_length Target_ID Target_length Target_description E-value Identity% Aligned_seq_length Score Positives% Gaps% TC002601|TC002601-RA 1110 LDEC017246-RA 466 4e-67 80 286 255 0 TC002601|TC002601-RA 1110 LDEC017247-RA 324 7e-51 74 311 201 0 TC002601|TC002601-RA 1110 LDEC017243-RA 198 7e-32 82 139 138 0 TC004420|TC004420-RA 2424 LDEC001726-RA 705 2e-131 75 691 470 1 TC004420|TC004420-RA 2424 LDEC005773-RA 930 6e-18 70 215 93.3 1 TC002933|TC002933-RA 1227 LDEC020367-RA 588 6e-116 76 566 417 0 TC003405|TC003405-RA 1992 LDEC013444-RA 2363 0.0 74 1137 686 0 TC000165|TC000165-RA 2787 LDEC019591-RA 4097 0.0 72 1274 663 1 TC000040|TC000040-RA 1119 LDEC004542-RA 1044 2e-152 79 613 538 0 TC000040|TC000040-RA 1119 LDEC004546-RA 750 2e-33 80 159 143 0 TC004683|TC004683-RA 2688 LDEC020746-RA 2851 3e-142 65 2662 506 2 TC003818|TC003818-RA 1698 LDEC015830-RA 3385 4e-177 71 1290 621 1 TC003818|TC003818-RA 1698 LDEC012162-RA 1503 2e-129 69 1218 462 2 TC003752|TC003752-RA|PH 3219 LDEC012135-RA 2875 1e-72 73 471 275 2 TC003752|TC003752-RA|PH 3219 LDEC012132-RA 834 2e-51 70 433 205 9 TC003752|TC003752-RA|PH 3219 LDEC012134-RA 726 6e-45 71 385 183 5 TC003944|TC003944-RA 1131 LDEC020822-RA 1131 0.0 82 1131 1124 0 TC003944|TC003944-RA 1131 LDEC008164-RA 1131 0.0 78 1131 899 0 TC003944|TC003944-RA 1131 LDEC011117-RA 666 9e-164 82 579 576 0 TC003944|TC003944-RA 1131 LDEC008163-RA 774 2e-147 79 609 522 0 TC003944|TC003944-RA 1131 LDEC013338-RA 786 4e-85 83 302 315 0 TC003944|TC003944-RA 1131 LDEC011244-RA 1128 1e-73 67 938 277 1 TC003944|TC003944-RA 1131 LDEC011116-RA 440 4e-60 83 218 232 0 TC003944|TC003944-RA 1131 LDEC011241-RA 960 3e-37 65 785 156 2 TC003944|TC003944-RA 1131 LDEC013336-RA 612 1e-16 72 156 87.8 0 TC004425|TC004425-RA 1692 LDEC018935-RA 2340 0.0 79 1579 1361 0 TC004425|TC004425-RA 1692 LDEC000229-RA 1959 1e-80 66 1478 300 3 TC004425|TC004425-RA 1692 LDEC000232-RA 1956 2e-79 65 1473 297 3 TC004425|TC004425-RA 1692 LDEC014525-RA 1911 3e-70 65 1495 266 3 TC004425|TC004425-RA 1692 LDEC000230-RA 2874 6e-60 68 689 232 1 TC004425|TC004425-RA 1692 LDEC009663-RA 1716 8e-59 65 1182 228 4 TC004425|TC004425-RA 1692 LDEC007413-RA 1305 3e-45 66 764 183 2 TC004425|TC004425-RA 1692 LDEC000139-RA 2196 7e-34 70 356 145 1 TC004425|TC004425-RA 1692 LDEC014524-RA 513 3e-33 68 475 143 4 TC004425|TC004425-RA 1692 LDEC012375-RA 1521 7e-28 69 323 125 1 TC004425|TC004425-RA 1692 LDEC011194-RA 1384 3e-26 65 596 120 3 TC004425|TC004425-RA 1692 LDEC014527-RA 360 6e-16 71 180 86.0 0 TC004425|TC004425-RA 1692 LDEC009662-RA 393 2e-15 75 121 84.2 0 TC001600|TC001600-RA 630 LDEC017315-RA 630 2e-155 79 626 547 0 TC001600|TC001600-RA 630 LDEC006963-RA 627 9e-47 68 476 187 3 TC002574|TC002574-RA 1527 LDEC007903-RA 1622 0.0 80 1527 1386 0 TC004029|TC004029-RA 939 LDEC017202-RA 1387 9e-150 73 962 529 3 TC003020|TC003020-RA 1806 LDEC005928-RA 2025 3e-160 71 1158 565 4 TC003731|TC003731-RA 1182 LDEC014838-RA 1372 4e-86 75 478 318 3 TC003731|TC003731-RA 1182 LDEC004239-RA 1034 1e-85 78 393 316 0 TC002003|TC002003-RA|CACT 1092 LDEC003901-RA 386 2e-20 76 143 100 0 TC002003|TC002003-RA|CACT 1092 LDEC003916-RA 1524 3e-11 72 142 69.8 1 TC000082|TC000082-RA 642 LDEC013408-RA 1263 6e-62 71 469 237 3 TC002507|TC002507-RA 5664 LDEC004538-RA 4296 0.0 71 2008 991 2 TC002507|TC002507-RA 5664 LDEC004541-RA 2328 0.0 72 1803 951 2 TC002507|TC002507-RA 5664 LDEC013425-RA 2873 0.0 76 1033 751 1 TC002507|TC002507-RA 5664 LDEC013427-RA 673 3e-115 75 637 417 2 TC002507|TC002507-RA 5664 LDEC013426-RA 429 3e-89 77 428 331 0 TC002507|TC002507-RA 5664 LDEC023665-RA 272 7e-47 76 263 190 0 TC002507|TC002507-RA 5664 LDEC023666-RA 268 1e-42 77 222 176 0 TC002507|TC002507-RA 5664 LDEC013428-RA 830 4e-11 76 99 71.6 0 TC000161|TC000161-RA 813 LDEC016690-RA 2455 9e-175 77 812 612 0 TC000029|TC000029-RA 2298 LDEC021340-RA 2328 6e-81 68 907 302 1 TC000029|TC000029-RA 2298 LDEC021341-RA 1326 3e-27 74 201 123 0 TC000029|TC000029-RA 2298 LDEC021337-RA 402 1e-19 75 150 98.7 5 TC000614|TC000614-RA 741 LDEC010921-RA 441 6e-69 74 404 260 0 TC004760|TC004760-RA 558 TC003079|TC003079-RA 2847 LDEC021697-RA 920 3e-66 78 320 253 0 TC003079|TC003079-RA 2847 LDEC021696-RA 676 7e-37 72 269 156 6 TC003079|TC003079-RA 2847 LDEC021692-RA 423 3e-16 75 132 87.8 2 TC003079|TC003079-RA 2847 LDEC021693-RA 1371 4e-15 76 121 84.2 1 TC000801|TC000801-RA 1398 LDEC001741-RA 2274 0.0 77 1047 778 0 TC000258|TC000258-RA 834 LDEC019981-RA 974 1e-116 73 737 419 0 TC002881|TC002881-RA 8340 LDEC004028-RA 7908 3e-161 65 2914 571 2 TC000069|TC000069-RA 708 LDEC003296-RA 1108 3e-104 73 641 378 1 TC004599|TC004599-RA 600 TC003747|TC003747-RA 846 LDEC012319-RA 378 7e-24 69 326 111 3 TC007891|TC007891-RA|GLEAN_07891 798 LDEC002389-RA 3235 8e-137 74 803 486 1 TC006902|TC006902-RA 561 LDEC010072-RA 978 5e-68 74 392 257 0 TC007846|TC007846-RA|GLEAN_07846 1491 LDEC003015-RA 1560 4e-75 66 1180 282 6 TC004949|TC004949-RA 2496 LDEC017045-RA 1364 3e-174 72 1156 612 1 TC004949|TC004949-RA 2496 LDEC017046-RA 772 9e-22 74 168 105 0 TC004949|TC004949-RA 2496 LDEC024389-RA 234 3e-21 79 117 104 0 TC004949|TC004949-RA 2496 LDEC011821-RA 225 6e-18 73 172 93.3 2 TC004949|TC004949-RA 2496 LDEC006134-RA 920 7e-17 67 307 89.7 1 TC010405|TC010405-RA|SRP 1587 LDEC012258-RA 4559 3e-77 70 705 289 7 TC010405|TC010405-RA|SRP 1587 LDEC023547-RA 266 3e-19 75 143 96.9 0 TC010405|TC010405-RA|SRP 1587 LDEC012259-RA 2424 1e-12 71 154 75.2 0 TC011058|TC011058-RA 2646 LDEC016479-RA 2243 0.0 74 1490 987 3 TC011058|TC011058-RA 2646 LDEC016478-RA 2843 1e-141 70 1210 504 2 TC011058|TC011058-RA 2646 LDEC016480-RA 959 1e-121 73 720 437 8 TC009040|TC009040-RA 1278 LDEC015369-RA 714 3e-82 73 537 306 0 TC006375|TC006375-RA 1170 LDEC014093-RA 1092 5e-173 76 828 607 0 TC010557|TC010557-RA 1431 LDEC003829-RA 2666 0.0 79 1431 1205 0 TC009010|TC009010-RA 876 LDEC004838-RA 5393 8e-157 75 830 553 0 TC006982|TC006982-RA 3267 LDEC005329-RA 4344 0.0 76 1247 888 0 TC011082|TC011082-RA 1320 LDEC003762-RA 1095 3e-120 71 892 432 1 TC011082|TC011082-RA 1320 LDEC012644-RA 2433 8e-102 74 627 370 1 TC011082|TC011082-RA 1320 LDEC012645-RA 432 2e-26 75 171 120 0 TC005869|TC005869-RA 936 LDEC002449-RA 992 7e-88 75 464 324 0 TC008263|TC008263-RA|GLEAN_08263 7200 LDEC020295-RA 5151 5e-62 76 326 241 0 TC008263|TC008263-RA|GLEAN_08263 7200 LDEC023649-RA 1716 7e-48 75 281 194 1 TC008263|TC008263-RA|GLEAN_08263 7200 LDEC020294-RA 3072 1e-45 75 272 187 1 TC008263|TC008263-RA|GLEAN_08263 7200 LDEC013432-RA 2184 6e-11 86 59 71.6 0 TC006281|TC006281-RA 1587 LDEC002447-RA 3731 0.0 75 1508 1005 1 TC007640|TC007640-RA|GLEAN_07640 1920 LDEC004601-RA 1704 1e-165 71 1206 583 1 TC007640|TC007640-RA|GLEAN_07640 1920 LDEC018707-RA 1050 1e-114 69 1044 414 2 TC007640|TC007640-RA|GLEAN_07640 1920 LDEC018704-RA 750 1e-50 67 626 201 0 TC009491|TC009491-RA 2109 LDEC019906-RA 1716 0.0 72 1249 648 4 TC006253|TC006253-RA 5031 LDEC017237-RA 3877 0.0 73 1150 666 2 TC006253|TC006253-RA 5031 LDEC017235-RA 780 9e-146 80 584 518 1 TC006253|TC006253-RA 5031 LDEC024037-RA 564 1e-111 76 566 405 1 TC006253|TC006253-RA 5031 LDEC017236-RA 733 2e-102 70 786 374 7 TC008407|TC008407-RA|GLEAN_08407 4287 LDEC006484-RA 1545 0.0 71 1442 702 1 TC008190|TC008190-RA|GLEAN_08190 2592 LDEC006073-RA 1866 0.0 74 1284 832 2 TC008190|TC008190-RA|GLEAN_08190 2592 LDEC006078-RA 4887 2e-55 68 647 217 3 TC008190|TC008190-RA|GLEAN_08190 2592 LDEC024640-RA 191 3e-34 78 179 147 0 TC008671|TC008671-RA 729 LDEC010714-RA 684 6e-138 83 479 489 0 TC008662|TC008662-RA 576 TC006047|TC006047-RA 897 LDEC001900-RA 615 1e-39 72 309 163 1 TC010367|TC010367-RA 702 LDEC013831-RA 1138 6e-100 72 706 363 4 TC009191|TC009191-RA 2298 LDEC011997-RA 2905 0.0 76 2331 1671 2 TC009191|TC009191-RA 2298 LDEC011996-RA 1885 2e-16 74 138 87.8 0 TC006679|TC006679-RA 4035 LDEC010122-RA 4734 0.0 71 3131 1409 4 TC007999|TC007999-RA|GLEAN_07999 1230 LDEC016117-RA 657 8e-89 78 399 327 0 TC007999|TC007999-RA|GLEAN_07999 1230 LDEC016378-RA 1453 4e-17 68 242 89.7 0 TC005313|TC005313-RA 1107 LDEC004927-RA 1466 2e-146 73 922 518 1 TC006514|TC006514-RA 2229 LDEC001544-RA 2561 1e-82 66 969 307 5 TC007510|TC007510-RA|GLEAN_07510 1338 LDEC001384-RA 621 4e-99 74 546 361 4 TC011068|TC011068-RA 2748 LDEC013339-RA 4232 2e-120 65 1894 434 8 TC011068|TC011068-RA 2748 LDEC024382-RA 381 4e-65 78 303 250 0 TC009328|TC009328-RA 867 LDEC004416-RA 729 5e-121 74 699 434 1 TC006188|TC006188-RA 3777 LDEC006770-RA 744 3e-30 64 651 134 8 TC015322|TC015322-RA|GLEAN_15322 1557 LDEC020740-RA 1901 0.0 77 1548 1193 0 TC011725|TC011725-RA 771 LDEC007421-RA 930 4e-64 72 458 244 0 TC014785|TC014785-RA 2271 LDEC005485-RA 2580 0.0 73 1710 993 2 TC014109|TC014109-RA 522 LDEC016281-RA 840 1e-125 79 518 448 0 TC015727|TC015727-RA|GLEAN_15727 2133 LDEC005185-RA 1566 0.0 75 1184 801 0 TC015727|TC015727-RA|GLEAN_15727 2133 LDEC005186-RA 434 1e-26 73 215 122 0 TC015014|TC015014-RA|GLEAN_15014 5055 LDEC017401-RA 6374 0.0 76 5061 3743 1 TC014300|TC014300-RA 2703 LDEC003093-RA 3029 1e-83 69 747 311 1 TC013939|TC013939-RA 2418 LDEC008911-RA 2245 0.0 76 1261 879 1 TC013939|TC013939-RA 2418 LDEC008912-RA 511 3e-28 78 155 127 0 TC014413|TC014413-RA 1278 LDEC012710-RA 1278 0.0 75 1276 854 0 TC014413|TC014413-RA 1278 LDEC023884-RA 1278 0.0 74 1277 794 0 TC014413|TC014413-RA 1278 LDEC019718-RA 1158 0.0 74 1057 677 0 TC014413|TC014413-RA 1278 LDEC006986-RA 1008 1e-168 73 1007 592 0 TC014413|TC014413-RA 1278 LDEC021344-RA 924 1e-163 75 884 576 1 TC014413|TC014413-RA 1278 LDEC006678-RA 1318 6e-154 77 729 544 0 TC014413|TC014413-RA 1278 LDEC005105-RA 1338 1e-143 73 850 509 0 TC014413|TC014413-RA 1278 LDEC005106-RA 324 3e-44 72 322 179 0 TC014413|TC014413-RA 1278 LDEC021342-RA 441 2e-19 75 143 96.9 0 TC014931|TC014931-RA|GLEAN_14931 1455 TC015935|TC015935-RA 2910 LDEC014614-RA 912 7e-132 73 795 471 0 TC014730|TC014730-RA 1524 LDEC012509-RA 1647 8e-147 71 1143 520 3 TC030619|TC030619-RA 2418 LDEC010363-RA 7525 3e-65 76 356 250 4 TC012455|TC012455-RA 3621 LDEC017013-RA 2224 1e-72 68 828 275 1 TC012455|TC012455-RA 3621 LDEC017012-RA 1254 8e-63 71 497 242 2 TC011204|TC011204-RA 615 LDEC005567-RA 531 1e-69 74 420 262 0 TC011120|TC011120-RA|ROP 1737 LDEC018675-RA 3899 0.0 77 1182 890 0 TC014294|TC014294-RA 3339 LDEC008327-RA 3078 0.0 73 1748 980 1 TC013746|TC013746-RA 1131 LDEC008164-RA 1131 2e-159 71 1131 562 0 TC013746|TC013746-RA 1131 LDEC020822-RA 1131 2e-141 70 1131 502 0 TC013746|TC013746-RA 1131 LDEC008163-RA 774 1e-92 72 613 340 0 TC013746|TC013746-RA 1131 LDEC011117-RA 666 1e-79 72 583 297 0 TC013746|TC013746-RA 1131 LDEC013338-RA 786 9e-75 80 305 280 0 TC013746|TC013746-RA 1131 LDEC011244-RA 1128 9e-50 65 936 197 2 TC013746|TC013746-RA 1131 LDEC011116-RA 440 2e-32 74 226 140 1 TC013746|TC013746-RA 1131 LDEC011246-RA 891 1e-29 65 710 131 2 TC013746|TC013746-RA 1131 LDEC013336-RA 612 5e-27 77 155 122 0 TC016270|TC016270-RA 1821 LDEC000567-RA 3893 0.0 70 1646 783 3 TC013245|TC013245-RA|FKH 1296 LDEC012456-RA 1284 0.0 73 1272 744 5 TC013245|TC013245-RA|FKH 1296 LDEC021908-RA 1098 4e-23 70 264 109 1 TC013245|TC013245-RA|FKH 1296 LDEC023181-RA 537 2e-14 70 191 80.6 3 TC013003|TC013003-RA 1578 LDEC007222-RA 1952 4e-87 69 850 322 2 TC012723|TC012723-RA 1605 LDEC010834-RA 702 3e-108 72 686 392 7 TC012723|TC012723-RA 1605 LDEC010835-RA 1722 2e-46 65 690 187 12 TC011708|TC011708-RA 939 LDEC010231-RA 1125 2e-37 69 340 156 10 TC011708|TC011708-RA 939 LDEC001065-RA 1748 1e-15 67 269 84.2 7 TC030579|TC030579-RA 1083 LDEC006220-RA 1605 8e-158 72 1077 556 0 TC030625|TC030625-RA 822 LDEC010014-RA 928 7e-151 79 633 533 1 TC030625|TC030625-RA 822 LDEC022267-RA 570 1e-59 68 602 230 11 TC030625|TC030625-RA 822 LDEC017673-RA 363 2e-25 66 398 116 16 TC030666|TC030666-RA|GLEAN_15729-OG20814 792 LDEC023007-RA 708 1e-45 68 565 183 2 TC030666|TC030666-RA|GLEAN_15729-OG20814 792 LDEC002501-RA 255 7e-30 73 229 131 3 TC015321|TC015321-RA|GLEAN_15321 984 LDEC001822-RA 1137 0.0 80 984 901 0 TC015321|TC015321-RA|GLEAN_15321 984 LDEC011629-RA 1061 7e-145 73 885 513 1 TC015321|TC015321-RA|GLEAN_15321 984 LDEC006058-RA 776 2e-31 65 586 136 4 TC013571|TC013571-RA 876 LDEC019570-RA 432 2e-56 77 279 219 0 TC012381|TC012381-RA 1086 LDEC021145-RA 1184 2e-108 73 683 392 0 TC012381|TC012381-RA 1086 LDEC013478-RA 888 3e-100 72 683 365 0 TC030708|TC030708-RA 2448 LDEC018094-RA 2528 4e-121 71 831 435 7 TC030708|TC030708-RA 2448 LDEC018093-RA 1649 2e-23 80 124 111 0 TC032227_transcript1 1788 LDEC003557-RA 2432 2e-141 67 1784 502 1 TC033679_transcript1 654 LDEC009011-RA 2188 1e-45 75 266 183 0 TC031473_transcript1 3126 LDEC005909-RA 3333 0.0 74 2765 1788 0 TC031972_transcript1 6414 LDEC018190-RA 5590 0.0 76 5107 3589 1 TC031972_transcript1 6414 LDEC023776-RA 686 4e-164 79 684 580 0 TC031145_transcript1 3522 LDEC012775-RA 1229 0.0 77 1216 915 0 TC031145_transcript1 3522 LDEC012776-RA 3867 0.0 73 1093 646 2 TC031145_transcript1 3522 LDEC012772-RA 399 3e-80 78 371 300 0 TC033251_transcript1 1605 LDEC001186-RA 1155 4e-157 72 1099 554 2 TC033251_transcript1 1605 LDEC001072-RA 2616 2e-128 67 1415 459 1 TC033251_transcript1 1605 LDEC016909-RA 777 1e-11 75 104 71.6 0 TC032389_transcript1 801 LDEC007826-RA 1052 2e-119 72 779 428 2
Export PNG
Creators and Submitter
Views: 865 Downloads: 32
Created: 10th Nov 2021 at 09:36
Last updated: 10th Nov 2021 at 09:36
AttributionsNone
Version History
Version 1 (earliest) Created 10th Nov 2021 at 09:36 by Andrej Blejec
No revision comments
Related items
Projects: testUpload, Test project 2019-10-30 11:13:00, Test project 2019-10-30 11:09:39, Test project 2019-11-02 19:40:30, Test project for pISA (104), _p_stRT, _p_Demo, Bla, Test project abcd, Test project 2021-07-18 22:00:39, Test project 2021-07-18 22:45:54, Test project 2021-07-18 23:08:33, Test project 2021-07-18 23:23:02, Test project 2021-07-21 00:08:04, Test project 2021-07-21 00:17:06, Test project 2021-07-21 00:18:25, Test project 2021-08-20 22:56:43, Testing of upload, _p_RNAinVAL
Institutions: National Institute of Biology, NIB, <script>alert('xss-institution-title')</script> & Test Institution
https://orcid.org/0000-0001-7484-6031
Local data management; testing uploading/downloading using API
Projects: testUpload, *, New project, New project 1, Test Project 7, Test Project, Test Project 8, Test Project 9, Test Project 10, Test Project 11, Test Project 12, Test Project 14, Test Project 13, Test Project 15, Test Project 16, Test Project 17, Test Project 18, Test: investigations 2019-10-30 11:00:08, Test: investigations 2019-10-30 11:02:00, Test project 2019-10-30 11:04:02, Test project 2019-10-30 11:08:47, Test project 2019-10-30 11:09:39, Test project 2019-10-30 11:10:03, Test project 2019-10-30 11:13:00, Test project 2019-11-01 11:41:43, Test project 2019-11-01 11:44:23, Test Project 20, Test project 21 2019-11-01 11:44:23, Test Project 21, Test project 23 2019-11-01 11:44:23, Test project 24 2019-11-01 11:44:23, Test project 33 2019-11-01 11:57:55, Test project 2019-11-01 12:01:35, Test project 40 2019-11-01 11:57:55, Test project 41 2019-11-01 11:57:55, Test project 42 2019-11-01 11:57:55, Test project 43 2019-11-01 11:57:55, Test project 44 2019-11-01 11:57:55, Test project 47 2019-11-01 11:57:55, Test project 48 2019-11-01 11:57:55, Test project 2019-11-01 19:36:07, Test project 2019-11-02 19:35:45, Test project 2019-11-02 19:40:30, Test project 50 2019-11-01 11:57:55, Test project 2019-11-02 19:47:45, Test project 51 2019-11-01 11:57:55, Test project 2019-11-02 20:22:36, Test project 2019-11-02 22:06:58, Test project 2019-11-02 22:10:04, Test project for pISA (104), _p_stRT, Test project 2019-11-13 21:46:46, Test project 2019-11-13 21:57:39, Test project 2019-11-13 21:59:51, Test project 2021-07-12 18:25:58, _p_Demo, Bla, Test project 2021-07-14 20:52:52, Test project 2021-07-14 20:54:23, Test project 2021-07-14 20:57:21, Test project 2021-07-15 23:13:46, Test project 2021-07-15 23:14:58, Test project 2021-07-15 23:16:29, Test project 2021-07-16 18:42:56, Test project 2021-07-16 18:43:56, Test project 2021-07-16 18:58:32, Test project 2021-07-16 19:00:28, Test project 2021-07-16 19:14:43, Test project 2021-07-16 19:17:03, Test project 2021-07-16 20:07:34, Test project 2021-07-17 20:31:23, Test project 2021-07-17 20:49:21, Test project abc, Test project abcd, Test project abcde, Test project 2021-07-18 21:54:46, Test project 2021-07-18 22:00:39, Test project 2021-07-18 23:08:33, Test project 2021-07-18 23:23:02, Test project 2021-07-21 00:08:04, Test project 2021-07-21 00:17:06, Test project 2021-07-21 00:18:25, Test project 2021-08-20 22:56:43, Testing of upload, _p_RNAinVAL
Web page: Not specified
Test upload using seekr before upload to FAIRDOMHub
Programme: pISA-tree
Public web page: Not specified
Short Name: 01_LabTrials Title: Laboratory trials Description: Selection of targets and their validation in trials performed in the laboratories and greenhouse at NIB Phenodata: ./phenodata_20210113.txt pISA Investigation creation date: 2021-01-13 pISA Investigation creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Studies: Investigation files, _S_01_TargetSelect, _S_02_dsRNAorder, _S_03_dsRNAprod, _S_04_Stages, _S_05_jun2016, _S_06_oct2016, _S_07_dec2016, _S_08_jan2017, _S_09_jun2017, _S_10_apr2018, _S_11_may2018
Assays: _A_00_Ecoli-dry, _A_00_dsRNA_stabil-wet, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01_AgroRNA-wet, _A_01_LitData-dry, _A_01_pIsol-wet, _A_02-RNAisol, _A_02-RNAisol, _A_02-RNAisol, _A_02_UlrichTop100-BLAST, _A_02_plasmid-SangerSeq, _A_02_qPCR_ampl_test-wet, _A_03-qPCR, _A_03-qPCR, _A_03-qPCR, _A_03_RNaseItreat-wet, _A_03_patentDB-BLAST, _A_03_stages-RNAisol, _A_04_ortho-BLAST, _A_04_prod-qPCR, _A_04_stages-qPCR, _A_05_CPB_gene-annot, _A_06_splitter_BLAST-dry, _A_07_MergeEvi-dry, _A_08_SelTargetsA-dry, _I_01_LabTrials-files, _S_01_TargetSelect-files, _S_02_dsRNAorder-files, _S_03_dsRNAprod-files, _S_04_Stages-files, _S_05_jun2016-files, _S_06_oct2016-files, _S_07_dec2016-files, _S_08_jan2017-files, _S_09_jun2017-files, _S_10_apr2018-files, _S_11_may2018-files
Short Name: 01_TargetSelect Title: Search for genes that might be good targets for control using dsRNAs (RNAi pesticides) Description: We will examine the results of RNAi screening experiments in model organisms (e.g. Drosophila melanogaster, Tribolium castaneum) as well as employ our previous data and literature knowledge on CPB gene expression and physiology Raw Data: pISA Study creation date: 2021-01-13 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 ...
Short Name: 02_UlrichTop100-BLAST Assay Class: DRY Assay Type: BLAST Title: BLAST Ulrich top100 hits from Tribolium against CPB Description: Analysis of BLAST results from a query of top100 differentially expressed genes of Tribolium castaneum against Colorado potato beetle transcripts pISA Assay creation date: 2021-01-13 pISA Assay creator: Marko Petek Phenodata: None Featuredata: Data:
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials
Study: _S_01_TargetSelect
