_S_10_apr2018

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Short Name: 10_apr2018 Title: CPB feeding experiment apr2018 Description: Colorado potato beetle dsRNA feeding trial performed in April 2018 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes

SEEK ID: https://testing.sysmo-db.org/studies/404

Investigation: _I_01_LabTrials

Projects: _p_RNAinVAL

Study position:

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Creators and Submitter

Creator

Andrej Blejec

Submitter

Andrej Blejec

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Views: 392

Created: 9th Nov 2021 at 20:58

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People (1)
Programmes (1)
Projects (1)
Investigations (1)
Assays (2)
Data files (18)
Documents (8)

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Andrej Blejec

Institutions: National Institute of Biology, NIB, <script>alert('xss-institution-title')</script> & Test Institution

https://orcid.org/0000-0001-7484-6031

Expertise: STatistics, R, Programming, Data Management

Tools: R, API

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pISA-tree

Local data management; testing uploading/downloading using API

Web page: Not specified

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_p_RNAinVAL

Test upload using seekr before upload to FAIRDOMHub

Programme: pISA-tree

Public web page: Not specified

Organisms: Not specified

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_I_01_LabTrials

_p_RNAinVAL

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Andrej Blejec

Short Name: 01_LabTrials Title: Laboratory trials Description: Selection of targets and their validation in trials performed in the laboratories and greenhouse at NIB Phenodata: ./phenodata_20210113.txt pISA Investigation creation date: 2021-01-13 pISA Investigation creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes

Submitter: Andrej Blejec

Studies: Investigation files, _S_01_TargetSelect, _S_02_dsRNAorder, _S_03_dsRNAprod, _S_04_Stages, _S_05_jun2016, _S_06_oct2016, _S_07_dec2016, _S_08_jan2017, _S_09_jun2017, _S_10_apr2018, _S_11_may2018

Assays: _A_00_Ecoli-dry, _A_00_dsRNA_stabil-wet, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_01_AgroRNA-wet, _A_01_LitData-dry, _A_01_pIsol-wet, _A_02-RNAisol, _A_02-RNAisol, _A_02-RNAisol, _A_02_UlrichTop100-BLAST, _A_02_plasmid-SangerSeq, _A_02_qPCR_ampl_test-wet, _A_03-qPCR, _A_03-qPCR, _A_03-qPCR, _A_03_RNaseItreat-wet, _A_03_patentDB-BLAST, _A_03_stages-RNAisol, _A_04_ortho-BLAST, _A_04_prod-qPCR, _A_04_stages-qPCR, _A_05_CPB_gene-annot, _A_06_splitter_BLAST-dry, _A_07_MergeEvi-dry, _A_08_SelTargetsA-dry, _I_01_LabTrials-files, _S_01_TargetSelect-files, _S_02_dsRNAorder-files, _S_03_dsRNAprod-files, _S_04_Stages-files, _S_05_jun2016-files, _S_06_oct2016-files, _S_07_dec2016-files, _S_08_jan2017-files, _S_09_jun2017-files, _S_10_apr2018-files, _S_11_may2018-files

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Created: 9th Nov 2021 at 20:41

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_S_10_apr2018-files

_p_RNAinVAL

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Andrej Blejec

Files connected to study: _S_10_apr2018

Submitter: Andrej Blejec

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_01_LabTrials

Study: _S_10_apr2018

Organisms: No organisms

SOPs: No SOPs

Data files: _STUDY_METADATA.TXT

Snapshots: No snapshots

Created: 9th Nov 2021 at 20:58, Last updated: 9th Nov 2021 at 20:58

_A_01-phenotyping

_p_RNAinVAL

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Andrej Blejec

Short Name: 01-phenotyping Assay Class: WET Assay Type: phenotyping Title: Measuring feeding trial parameters (using dsRNA produced in vivo in E coli) Description: Weight gain, survival, photos and other phenotypic observations pISA Assay creation date: 2021-05-10 pISA Assay creator: Marko Petek, Rok Ferenc Phenodata: ../../phenodata_20210113.txt Featuredata: Data:

Submitter: Andrej Blejec

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_01_LabTrials

Study: _S_10_apr2018

Organisms: No organisms

SOPs: No SOPs

Data files: _ASSAY_METADATA.TXT, _ASSAY_METADATA.TXT, other/RNAinVAL_dec2016_nalepke.xlsx, other/RNAinVAL_jun2017_nalepke.xlsx, other/RNAinVAL_oct2016_nalepke.xlsx, output/CPB_survival.xlsx, output/CPB_survival_ANONYMOUS.xlsx, output/TEHTALNI_LIST_steklo.xlsx, output/april2018_CPB_feeding_assays_results.xlsx, output/eggs_spraying_dsMESH.xlsx, output/grafi_with_survival_table_for_R.xlsx, output/jun2016_MeJA_exp_data_for_R.xlsx, output/jun2016_survival_data_for_R.xlsx, output/june2016_CPB_feeding_assay_results.xlsx, output/survival_dec2016-jan2017.xlsx, output/weighing_5groups - Copy.xlsx, reports/october2016_feeding_assay_results.xlsx

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Created: 10th Nov 2021 at 09:36, Last updated: 10th Nov 2021 at 13:52

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output/eggs_spraying_dsMESH.xlsx

_p_RNAinVAL

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Andrej Blejec

_p_RNAinVAL/_I_01_LabTrials/_S_11_may2018/_A_01-phenotyping/