- Order Studies
Short Name: 01_LabTrials Title: Laboratory trials Description: Selection of targets and their validation in trials performed in the laboratories and greenhouse at NIB Phenodata: ./phenodata_20210113.txt pISA Investigation creation date: 2021-01-13 pISA Investigation creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
SEEK ID: https://testing.sysmo-db.org/investigations/300
Projects: _p_RNAinVAL
Investigation position:
Export PNG
Views: 419
Created: 9th Nov 2021 at 18:42
This item has not yet been tagged.
Related items
Projects: testUpload, Test project 2019-10-30 11:13:00, Test project 2019-10-30 11:09:39, Test project 2019-11-02 19:40:30, Test project for pISA (104), _p_stRT, _p_Demo, Bla, Test project abcd, Test project 2021-07-18 22:00:39, Test project 2021-07-18 22:45:54, Test project 2021-07-18 23:08:33, Test project 2021-07-18 23:23:02, Test project 2021-07-21 00:08:04, Test project 2021-07-21 00:17:06, Test project 2021-07-21 00:18:25, Test project 2021-08-20 22:56:43, Testing of upload, _p_RNAinVAL
Institutions: National Institute of Biology, NIB, <script>alert('xss-institution-title')</script> & Test Institution
https://orcid.org/0000-0001-7484-6031Expertise: STatistics, R, Programming, Data Management
Local data management; testing uploading/downloading using API
Projects: testUpload, *, New project, New project 1, Test Project 7, Test Project, Test Project 8, Test Project 9, Test Project 10, Test Project 11, Test Project 12, Test Project 14, Test Project 13, Test Project 15, Test Project 16, Test Project 17, Test Project 18, Test: investigations 2019-10-30 11:00:08, Test: investigations 2019-10-30 11:02:00, Test project 2019-10-30 11:04:02, Test project 2019-10-30 11:08:47, Test project 2019-10-30 11:09:39, Test project 2019-10-30 11:10:03, Test project 2019-10-30 11:13:00, Test project 2019-11-01 11:41:43, Test project 2019-11-01 11:44:23, Test Project 20, Test project 21 2019-11-01 11:44:23, Test Project 21, Test project 23 2019-11-01 11:44:23, Test project 24 2019-11-01 11:44:23, Test project 33 2019-11-01 11:57:55, Test project 2019-11-01 12:01:35, Test project 40 2019-11-01 11:57:55, Test project 41 2019-11-01 11:57:55, Test project 42 2019-11-01 11:57:55, Test project 43 2019-11-01 11:57:55, Test project 44 2019-11-01 11:57:55, Test project 47 2019-11-01 11:57:55, Test project 48 2019-11-01 11:57:55, Test project 2019-11-01 19:36:07, Test project 2019-11-02 19:35:45, Test project 2019-11-02 19:40:30, Test project 50 2019-11-01 11:57:55, Test project 2019-11-02 19:47:45, Test project 51 2019-11-01 11:57:55, Test project 2019-11-02 20:22:36, Test project 2019-11-02 22:06:58, Test project 2019-11-02 22:10:04, Test project for pISA (104), _p_stRT, Test project 2019-11-13 21:46:46, Test project 2019-11-13 21:57:39, Test project 2019-11-13 21:59:51, Test project 2021-07-12 18:25:58, _p_Demo, Bla, Test project 2021-07-14 20:52:52, Test project 2021-07-14 20:54:23, Test project 2021-07-14 20:57:21, Test project 2021-07-15 23:13:46, Test project 2021-07-15 23:14:58, Test project 2021-07-15 23:16:29, Test project 2021-07-16 18:42:56, Test project 2021-07-16 18:43:56, Test project 2021-07-16 18:58:32, Test project 2021-07-16 19:00:28, Test project 2021-07-16 19:14:43, Test project 2021-07-16 19:17:03, Test project 2021-07-16 20:07:34, Test project 2021-07-17 20:31:23, Test project 2021-07-17 20:49:21, Test project abc, Test project abcd, Test project abcde, Test project 2021-07-18 21:54:46, Test project 2021-07-18 22:00:39, Test project 2021-07-18 23:08:33, Test project 2021-07-18 23:23:02, Test project 2021-07-21 00:08:04, Test project 2021-07-21 00:17:06, Test project 2021-07-21 00:18:25, Test project 2021-08-20 22:56:43, Testing of upload, _p_RNAinVAL
Web page: Not specified
Test upload using seekr before upload to FAIRDOMHub
Programme: pISA-tree
Public web page: Not specified
Organisms: Not specified
Short Name: 11_may2018 Title: CPB egg spraying experiment (dsMESH only) may2018 Description: Colorado potato beetle dsRNA egg spraying trial performed in May 2018 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_11_may2018-files
Snapshots: No snapshots
Short Name: 10_apr2018 Title: CPB feeding experiment apr2018 Description: Colorado potato beetle dsRNA feeding trial performed in April 2018 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_10_apr2018-files
Snapshots: No snapshots
Short Name: 09_jun2017 Title: CPB feeding experiment jun2017 Description: Colorado potato beetle dsRNA feeding trial performed in June 2017 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_09_jun2017-files
Snapshots: No snapshots
Short Name: 08_jan2017 Title: CPB feeding experiment jan2017 Description: Colorado potato beetle dsRNA feeding trial performed in January 2017 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_08_jan2017-files
Snapshots: No snapshots
Short Name: 07_dec2016 Title: CPB feeding experiment dec2016 Description: Colorado potato beetle dsRNA feeding trial performed in December 2016 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_07_dec2016-files
Snapshots: No snapshots
Short Name: 06_oct2016 Title: CPB feeding experiment oct2016 Description: Colorado potato beetle dsRNA feeding trial performed in October 2016 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_06_oct2016-files
Snapshots: No snapshots
Short Name: 05_jun2016 Title: CPB feeding experiment jun2016 Description: Colorado potato beetle dsRNA feeding trial performed in June 2016 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_05_jun2016-files
Snapshots: No snapshots
Short Name: 04_Stages Title: Expression of target genes in CPB developmental stages and body parts Description: Expression of target genes in CPB developmental stages and body parts Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_04_Stages-files
Snapshots: No snapshots
Short Name: 03_dsRNAprod Title: Production of selected desigend dsRNAs in-vivo Description: We established the production of two selected designed dsRNAs in-vivo in bacterial cultures of E. coli TH115 (DE3), a strain that does not produce RNases and is thus suitable for production of long dsRNA Raw Data: pISA Study creation date: 2021-01-14 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_03_dsRNAprod-files
Snapshots: No snapshots
Short Name: 02_dsRNAorder Title: Ordering the production of dsRNA of selected target genes Description: In-vitro production of dsRNAs designed to silence selected CPB genes Raw Data: pISA Study creation date: 2021-01-14 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _S_02_dsRNAorder-files
Snapshots: No snapshots
Short Name: 01_TargetSelect Title: Search for genes that might be good targets for control using dsRNAs (RNAi pesticides) Description: We will examine the results of RNAi screening experiments in model organisms (e.g. Drosophila melanogaster, Tribolium castaneum) as well as employ our previous data and literature knowledge on CPB gene expression and physiology Raw Data: pISA Study creation date: 2021-01-13 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 ...
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Snapshots: No snapshots
Investigation files _I_01_LabTrials
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Assays: _I_01_LabTrials-files
Snapshots: No snapshots
Files connected to investigation: _I_01_LabTrials
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: Investigation files
Organisms: No organisms
SOPs: No SOPs
Data files: _INVESTIGATION_METADATA.TXT, featuredata_02092021.txt, phenodata_20210113.txt, phenodata_20210113.xlsx, reports/literature_CPB_experimental_procedures...., reports/qPCR_silencing_effects_choose_experimen...
Snapshots: No snapshots
Files connected to study: _S_01_TargetSelect
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_01_TargetSelect
Files connected to study: _S_02_dsRNAorder
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_02_dsRNAorder
Files connected to study: _S_03_dsRNAprod
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_03_dsRNAprod
Files connected to study: _S_04_Stages
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_04_Stages
Files connected to study: _S_05_jun2016
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_05_jun2016
Files connected to study: _S_06_oct2016
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_06_oct2016
Files connected to study: _S_07_dec2016
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_07_dec2016
Organisms: No organisms
SOPs: No SOPs
Data files: _STUDY_METADATA.TXT, analytes.xlsx
Snapshots: No snapshots
Files connected to study: _S_08_jan2017
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_08_jan2017
Files connected to study: _S_09_jun2017
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_09_jun2017
Files connected to study: _S_10_apr2018
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_10_apr2018
Files connected to study: _S_11_may2018
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_11_may2018
Organisms: No organisms
SOPs: No SOPs
Data files: No Data files
Snapshots: No snapshots
Short Name: 01_LitData-dry Assay Class: DRY Assay Type: dry Title: Compiling literature data on RNAi screens in insects Description: Compiling articles and final results of insect RNAi screens in model organisms (e.g. Drosophila melanogaster, Tribolium castaneum) pISA Assay creation date: 2021-01-13 pISA Assay creator: Marko Petek Phenodata: None Featuredata: Data:
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_01_LabTrials | 2021-11-09 19:42:08
Study: _S_01_TargetSelect
_p_RNAinVAL/_I_01_LabTrials/_S_01_TargetSelect/_A_01_LitData-dry/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_01_TargetSelect
Assays: _A_01_LitData-dry
_p_RNAinVAL/_I_01_LabTrials/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: Investigation files
Assays: _I_01_LabTrials-files
_p_RNAinVAL/_I_01_LabTrials/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: Investigation files
Assays: _I_01_LabTrials-files
_p_RNAinVAL/_I_01_LabTrials/_S_10_apr2018/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_10_apr2018
Assays: _S_10_apr2018-files
_p_RNAinVAL/_I_01_LabTrials/_S_09_jun2017/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_09_jun2017
Assays: _S_09_jun2017-files
_p_RNAinVAL/_I_01_LabTrials/_S_08_jan2017/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_08_jan2017
Assays: _S_08_jan2017-files
_p_RNAinVAL/_I_01_LabTrials/_S_07_dec2016/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_07_dec2016
Assays: _S_07_dec2016-files
_p_RNAinVAL/_I_01_LabTrials/_S_07_dec2016/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_07_dec2016
Assays: _S_07_dec2016-files
_p_RNAinVAL/_I_01_LabTrials/_S_06_oct2016/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_06_oct2016
Assays: _S_06_oct2016-files
_p_RNAinVAL/_I_01_LabTrials/_S_05_jun2016/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_05_jun2016
Assays: _S_05_jun2016-files
_p_RNAinVAL/_I_01_LabTrials/_S_04_Stages/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_04_Stages
Assays: _S_04_Stages-files
_p_RNAinVAL/_I_01_LabTrials/_S_03_dsRNAprod/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_03_dsRNAprod
Assays: _S_03_dsRNAprod-files
_p_RNAinVAL/_I_01_LabTrials/_S_02_dsRNAorder/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_02_dsRNAorder
Assays: _S_02_dsRNAorder-files
_p_RNAinVAL/_I_01_LabTrials/_S_01_TargetSelect/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_01_TargetSelect
Assays: _S_01_TargetSelect-files
_p_RNAinVAL/_I_01_LabTrials/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: Investigation files
Assays: _I_01_LabTrials-files
_p_RNAinVAL/_I_01_LabTrials/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: Investigation files
Assays: _I_01_LabTrials-files
_p_RNAinVAL/_I_01_LabTrials/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: Investigation files
Assays: _I_01_LabTrials-files
_p_RNAinVAL/_I_01_LabTrials/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: Investigation files
Assays: _I_01_LabTrials-files
_p_RNAinVAL/_I_01_LabTrials/_S_01_TargetSelect/_A_01_LitData-dry/
Creator: Andrej Blejec
Submitter: Andrej Blejec
Investigations: _I_01_LabTrials | 2021-11-09 19:42:08
Studies: _S_01_TargetSelect
Assays: _A_01_LitData-dry