Assay metadata: 2019-10-23 23:38:30
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Details about assay

SEEK ID: https://testing.sysmo-db.org/documents/17?version=1

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Assay:	_A_080-LDA-Ref-R
Short Name:	080-LDA-Ref-R
Assay Class:	DRY
Assay Type:	R
Title:	Ponovljena LDA na podatkih MA, ki so poravnani glede na referencne vzorce
Description:	Ponovljene analize iz assay 065, vendar so podatki samo poravnani glede na mediane referenènih vzorcev za MA. 
Analyst:	AB
Phenodata:	phenodata_20190219.tsv
Featuredata:	
Data:	../_A_30-anotacija-eset-Stat/output/UM-med-ann-eset.Rdata
Markers:	../_A_049-produktivnost-HL-MTX-Stat/input/Marker_LIST_Andrej.txt
Selected markers:	./input/Marker_LIST_IZBOR_napovedno_modeliranje_1.txt
Top22:	./input/Top22.tsv
Annotation:	# in the study description
Output:	Tables with selected markers in folder ./ouptut
Reports:	produktivnost4*.pdf files; exclude correlated and keep the most expressed genes. Delete genes with low expressed genes in reference samples.
	
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Created: 23rd Oct 2019 at 21:38

Last updated: 23rd Oct 2019 at 21:38

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Version 1 (earliest) Created 23rd Oct 2019 at 21:38 by Andrej Blejec

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