_A_02-RNAisol
Single PageAssay: _A_02-RNAisol Short Name: 02-RNAisol Assay Class: WET Assay Type: RNAisol Title: RNA isolation and pre-qPCR sample prep Description: RNA isolation and sample preparation for qPCR pISA Assay creation date: 2021-05-10 pISA Assay creator: Marko Petek Lab manager: Marko Petek Phenodata: ../../phenodata_20210113.txt Featuredata: RNA ID: $_RNA Homogenisation protocol: handheld electric rotor-stator homogenization in tubes with Trizol Date Homogenisation: 2017-07-17 Isolation Protocol: ZymoRNA Date Isolation: 2017-07-17 Storage RNA: NA Dnase treatment protocol: Zymo DNase I Dnase ID: $_DNase Date DNAse_treatment: 2017-07-27 Storage_DNAse_treated: NA Operator: Marko Petek cDNA ID: $_cDNA DateRT: 2017-07-27 Notes: Data:
SEEK ID: https://testing.sysmo-db.org/assays/801
Experimental assay
Projects: _p_Demo
Investigation: _I_01_LabTrials | 2021-11-11 11:33:47
Study: _S_09_jun2017
Assay position:
Assay type: Experimental Assay Type
Technology type: Technology Type
Organisms: No organisms
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Created: 11th Nov 2021 at 10:35
Last updated: 11th Nov 2021 at 10:35
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Projects: testUpload, Test project 2019-10-30 11:13:00, Test project 2019-10-30 11:09:39, Test project 2019-11-02 19:40:30, Test project for pISA (104), _p_stRT, _p_Demo, Bla, Test project abcd, Test project 2021-07-18 22:00:39, Test project 2021-07-18 22:45:54, Test project 2021-07-18 23:08:33, Test project 2021-07-18 23:23:02, Test project 2021-07-21 00:08:04, Test project 2021-07-21 00:17:06, Test project 2021-07-21 00:18:25, Test project 2021-08-20 22:56:43, Testing of upload, _p_RNAinVAL
Institutions: National Institute of Biology, NIB, <script>alert('xss-institution-title')</script> & Test Institution
https://orcid.org/0000-0001-7484-6031
Local data management; testing uploading/downloading using API
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Web page: Not specified
This is a demo project used for the demonstration of R package seekr functionality. R package seekr is based on SEEKR-API and enables batch upload of files organized in pISA-tree structure.
Programme: pISA-tree
Public web page: https://github.com/NIB-SI/seekr
Investigation: _I_01_LabTrials Short Name: 01_LabTrials Title: Laboratory trials Description: Selection of targets and their validation in trials performed in the laboratories and greenhouse at NIB Phenodata: ./phenodata_20210113.txt pISA Investigation creation date: 2021-01-13 pISA Investigation creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Studies: _S_01_TargetSelect, _S_05_jun2016, _S_09_jun2017, _S_11_may2018
Assays: _A_01-phenotyping, _A_01-phenotyping, _A_01-phenotyping, _A_02-RNAisol, _A_05_CPB_gene-annot, _A_06_splitter_BLAST-dry
Study: _S_09_jun2017 Short Name: 09_jun2017 Title: CPB feeding experiment jun2017 Description: Colorado potato beetle dsRNA feeding trial performed in June 2017 Raw Data: pISA Study creation date: 2021-05-10 pISA Study creator: Marko Petek Principal investigator: Marko Petek License: CC BY 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_01_LabTrials | 2021-11-11 11:33:47
Assays: _A_01-phenotyping, _A_02-RNAisol
_p_RNAinVAL/_I_01_LabTrials/_S_09_jun2017/_A_02-RNAisol/
