Assays

What is an Assay?

829 Assays visible to you, out of a total of 1132

_A__S_02_denovo-files

_p_stRT

De novo assemblies De novo assemblies for cration of potato reference transcriptomes

Submitter: Andrej Blejec

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_STRT-1

Study: _S_02_denovo

Organisms: No organisms

SOPs: No SOPs

Data files: /reports/SupplementaryTableS2-Primary_potato_tr..., /reports/SupplementaryTableS2-Primary_potato_tr...

Snapshots: No snapshots

Created: 10th Nov 2019 at 23:04, Last updated: 13th Nov 2019 at 22:25

_A__S_01_sequences-files

_p_stRT

NGS sequences for de novo assembly NGS sequences for de novo assembly; input for Study 02_denovo

Submitter: Andrej Blejec

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_STRT-1

Study: _S_01_sequences

Organisms: No organisms

SOPs: No SOPs

Data files: /reports/SupplementaryTableS1-Input_sequences_i..., /reports/SupplementaryTableS1-Input_sequences_i...

Snapshots: No snapshots

Created: 10th Nov 2019 at 23:04, Last updated: 13th Nov 2019 at 22:25

_A_05_BUSCO-Stat

_p_stRT

Short Name: 05_BUSCO-Stat Assay Class: DRY Assay Type: Stat Title: BUSCO plots Description: BUSCO plots pISA Assay creation date: 2019-10-22 pISA Assay creator: Maja Zagorscak Analyst: Maja Zagorscak Phenodata: None Featuredata: Data:

Submitter: Andrej Blejec

Biological problem addressed: Model Analysis Type

Investigation: _I_STRT-1

Study: _S_04_stPanTr

Organisms: No organisms

Models: No Models

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 13th Nov 2019 at 22:13

_A_05_BUSCO-Stat-old

_p_stRT

BUSCO plots BUSCO plots

Submitter: Andrej Blejec

Biological problem addressed: Model Analysis Type

Investigation: _I_STRT-1

Study: _S_04_stPanTr

Organisms: No organisms

Models: No Models

SOPs: No SOPs

Data files: /input/path_to_files.txt, /intermediate/BUSCO_stPanTr_embryophyta_odb9.tsv, /intermediate/BUSCOall_embryophyta_odb9.tsv, /intermediate/evg_out.tsv, /reports/BUSCO_plots.html, /scripts/BUSCO_plots.Rmd

Snapshots: No snapshots

Created: 10th Nov 2019 at 23:23, Last updated: 13th Nov 2019 at 22:06

Test project for pISA (104)

Title: Test assay 2019-11-13 22:12:38 Description: Testing of upload

Submitter: Andrej Blejec

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Test investigation 2019-11-02 22:39:24

Study: Test study 2019-11-04 13:40:44

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 13th Nov 2019 at 21:12

Test project for pISA (104)

Title Test assay 2019-11-13 22:09:58 Description Testing of upload

Submitter: Andrej Blejec

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Test investigation 2019-11-02 22:39:24

Study: Test study 2019-11-04 13:40:44

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 13th Nov 2019 at 21:10

Test project for pISA (104)

Submitter: Andrej Blejec

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Test investigation 2019-11-02 22:39:24

Study: Test study 2019-11-04 13:40:44

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 13th Nov 2019 at 21:04

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