Assays
What is an Assay?Filters
Solanum tuberosum Pan-Transcriptome Solanum tuberosum Pan-Transcriptome
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_STRT-1
Study: _S_04_stPanTr
BUSCO post filtering and reassignment BUSCO post filtering and reassignment
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: _I_STRT-1
Study: _S_03_stCuSTr
TransRate post filtering and reassignment TransRate post filtering and reassignment
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: _I_STRT-1
Study: _S_03_stCuSTr
Components: tr2aacds headers, cdhit-2d Components: tr2aacds headers, cdhit-2d; postfiltering redefinition of paralogue clusters
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: _I_STRT-1
Study: _S_03_stCuSTr
Filtering according to biological evidence; removal of contaminants, chimeras and suspicious constructs Filtering according to biological evidence; removal of contaminants, chimeras and suspicious constructs
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: _I_STRT-1
Study: _S_03_stCuSTr
Submitter: Andrej Blejec
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_STRT-1
Study: _S_03_stCuSTr
VecScreen on raw tr2aacds output VecScreen and blastn on raw tr2aacds output
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: _I_STRT-1
Study: _S_03_stCuSTr