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1 Assay visible to you, out of a total of 1

_A_03.2_components

_p_stRT

Components: tr2aacds headers, cdhit-2d Components: tr2aacds headers, cdhit-2d; postfiltering redefinition of paralogue clusters

Submitter: Andrej Blejec

Biological problem addressed: Model Analysis Type

Investigation: _I_STRT-1

Study: _S_03_stCuSTr

Organisms: No organisms

Models: No Models

SOPs: No SOPs

Data files: /intermediate_4_cdhit-2d.tar.gz, /output/3cv_cdhit-2d_weak-components.txt.gz, /output/3cv_cdhit-2d_weak-components_alias.txt.gz, /output/fasta_1A_rep-per-cv/stCuSTr-D_aa_repres..., /output/fasta_1A_rep-per-cv/stCuSTr-D_cds_repre..., /output/fasta_1A_rep-per-cv/stCuSTr-D_tr_repres..., /output/fasta_1A_rep-per-cv/stCuSTr-P_aa_repres..., /output/fasta_1A_rep-per-cv/stCuSTr-P_cds_repre..., /output/fasta_1A_rep-per-cv/stCuSTr-P_tr_repres..., /output/fasta_1A_rep-per-cv/stCuSTr-R_aa_repres..., /output/fasta_1A_rep-per-cv/stCuSTr-R_cds_repre..., /output/fasta_1A_rep-per-cv/stCuSTr-R_tr_repres..., /output/fasta_1B_alt-per-cv/stCuSTr-D_aa_altern..., /output/fasta_1B_alt-per-cv/stCuSTr-D_cds_alter..., /output/fasta_1B_alt-per-cv/stCuSTr-D_tr_altern..., /output/fasta_1B_alt-per-cv/stCuSTr-P_aa_altern..., /output/fasta_1B_alt-per-cv/stCuSTr-P_cds_alter..., /output/fasta_1B_alt-per-cv/stCuSTr-P_tr_altern..., /output/fasta_1B_alt-per-cv/stCuSTr-R_aa_altern..., /output/fasta_1B_alt-per-cv/stCuSTr-R_cds_alter..., /output/fasta_1B_alt-per-cv/stCuSTr-R_tr_altern..., /output/fasta_2_all-per-cv/stCuSTr-D_aa_all.fas..., /output/fasta_2_all-per-cv/stCuSTr-D_cds_all.fa..., /output/fasta_2_all-per-cv/stCuSTr-D_tr_all.fas..., /output/fasta_2_all-per-cv/stCuSTr-P_aa_all.fas..., /output/fasta_2_all-per-cv/stCuSTr-P_cds_all.fa..., /output/fasta_2_all-per-cv/stCuSTr-P_tr_all.fas..., /output/fasta_2_all-per-cv/stCuSTr-R_aa_all.fas..., /output/fasta_2_all-per-cv/stCuSTr-R_cds_all.fa..., /output/fasta_2_all-per-cv/stCuSTr-R_tr_all.fas..., /output/fasta_3A_utrorfs-per-cv.tar.gz, /output/fasta_3B_eliminated-per-cv.tar.gz, /scripts/i1.0_copy-to-input.txt, /scripts/i1.1_parse-filtered-lists.pl, /scripts/i1.2_parse-fasta-files-pt1.pl, /scripts/i1.2_parse-fasta-files-pt2.pl, /scripts/i1.3_parse-headers.pl, /scripts/i2.1_prepare-network.pl, /scripts/i2.2_prepare-filter-master-file.pl, /scripts/i2.3_parse-n-filter-weak-components.pl, /scripts/i2.4_prepare-rep-component-table.pl, /scripts/i3.1_prepare-fastas-pt1.pl, /scripts/i3.2_prepare-fastas-pt2.pl, /scripts/i4.1_cdhit-2d.sh, /scripts/i5.1_parse-cdhit-2d.sh, /scripts/i5.2_parse-cdhit-2d-weak-components.Rmd, /scripts/i5.3_prepare-fastas.sh

Snapshots: No snapshots

Created: 10th Nov 2019 at 23:13, Last updated: 10th Nov 2019 at 23:15

(v.1.15.0-pre)

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