<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" level="3" version="1">
<model id="martins2" name="martins2" substanceUnits="mole" timeUnits="second" extentUnits="mole">
<listOfUnitDefinitions>
<unitDefinition metaid="metaid_0" id="per_hour" name="per_hour">
<listOfUnits>
<unit kind="second" exponent="1" scale="0" multiplier="3600"/>
</listOfUnits>
</unitDefinition>
</listOfUnitDefinitions>
<listOfCompartments>
<compartment metaid="metaid_1" id="compartment" spatialDimensions="3" size="1" units="litre" constant="true"/>
</listOfCompartments>
<listOfSpecies>
<species metaid="metaid_2" id="PsbA1" name="PsbA1" compartment="compartment" initialAmount="0" hasOnlySubstanceUnits="true" boundaryCondition="false" constant="false"/>
<species metaid="metaid_3" id="PsbA1mut" name="PsbA1mut" compartment="compartment" initialAmount="0" hasOnlySubstanceUnits="true" boundaryCondition="false" constant="false"/>
<species metaid="metaid_4" id="SigC" name="SigC" compartment="compartment" initialAmount="0" hasOnlySubstanceUnits="true" boundaryCondition="false" constant="false"/>
<species metaid="metaid_5" id="SigC_a" name="SigC_a" compartment="compartment" initialAmount="0" hasOnlySubstanceUnits="true" boundaryCondition="false" constant="false"/>
<species metaid="metaid_6" id="SigCtot" name="SigCtot" compartment="compartment" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
</listOfSpecies>
<listOfParameters>
<parameter metaid="metaid_7" id="A" name="A" value="1" constant="true"/>
<parameter metaid="metaid_8" id="K_theta_p" value="0.1" constant="false"/>
<parameter metaid="metaid_9" id="K_theta_s" value="0.9" constant="false"/>
<parameter metaid="metaid_10" id="Ksp" value="2.5" constant="false"/>
<parameter metaid="metaid_11" id="Kss" value="1.4" constant="false"/>
<parameter metaid="metaid_12" id="Tc" name="Tc" value="24" constant="true"/>
<parameter metaid="metaid_13" id="Td" name="Td" value="19.5" constant="true"/>
<parameter metaid="metaid_14" id="Ts" name="Ts" value="6" constant="true"/>
<parameter metaid="metaid_15" id="Ty" name="Ty" value="5.6" constant="true"/>
<parameter metaid="metaid_16" id="Vp" value="0.2" constant="false"/>
<parameter metaid="metaid_17" id="Vs" value="3.7" constant="false"/>
<parameter metaid="metaid_18" id="bas" name="bas" value="0" constant="true"/>
<parameter metaid="metaid_19" id="delcc" name="delcc" value="1" constant="true"/>
<parameter metaid="metaid_20" id="delcp" name="delcp" value="1" constant="true"/>
<parameter metaid="metaid_21" id="h_theta_p" value="2" constant="false"/>
<parameter metaid="metaid_22" id="h_theta_s" value="5" constant="false"/>
<parameter metaid="metaid_23" id="hsp" value="5" constant="false"/>
<parameter metaid="metaid_24" id="hss" value="2" constant="false"/>
<parameter metaid="metaid_25" id="kb" name="kb" value="0.1" constant="true"/>
<parameter metaid="metaid_26" id="kf" name="kf" value="10" constant="true"/>
<parameter metaid="metaid_27" id="m" name="m" value="1" constant="true"/>
<parameter metaid="metaid_28" id="theta" name="theta" value="0" constant="false"/>
</listOfParameters>
<listOfRules>
<assignmentRule metaid="metaid_29" variable="SigCtot">
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<plus/>
<ci> SigC </ci>
<ci> SigC_a </ci>
</apply>
</math>
</assignmentRule>
<assignmentRule metaid="metaid_30" variable="theta">
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<plus/>
<ci> bas </ci>
<apply>
<times/>
<apply>
<minus/>
<ci> A </ci>
<ci> bas </ci>
</apply>
<apply>
<power/>
<apply>
<times/>
<apply>
<divide/>
<cn> 1 </cn>
<cn> 2 </cn>
</apply>
<apply>
<plus/>
<cn> 1 </cn>
<apply>
<cos/>
<apply>
<divide/>
<apply>
<times/>
<cn> 2 </cn>
<pi/>
<csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/time"> time </csymbol>
</apply>
<ci> Tc </ci>
</apply>
</apply>
</apply>
</apply>
<ci> m </ci>
</apply>
</apply>
</apply>
</math>
</assignmentRule>
</listOfRules>
<listOfReactions>
<reaction metaid="metaid_33" id="v1" reversible="true" fast="false">
<listOfReactants>
<speciesReference metaid="metaid_31" species="SigC" stoichiometry="1" constant="true"/>
</listOfReactants>
<listOfProducts>
<speciesReference metaid="metaid_32" species="SigC_a" stoichiometry="1" constant="true"/>
</listOfProducts>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> kf </ci>
<ci> SigC </ci>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_36" id="v2" reversible="true" fast="false">
<listOfReactants>
<speciesReference metaid="metaid_34" species="SigC_a" stoichiometry="1" constant="true"/>
</listOfReactants>
<listOfProducts>
<speciesReference metaid="metaid_35" species="SigC" stoichiometry="1" constant="true"/>
</listOfProducts>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<ci> kb </ci>
<ci> SigC_a </ci>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_38" id="v3" reversible="true" fast="false">
<listOfReactants>
<speciesReference metaid="metaid_37" species="SigC_a" stoichiometry="1" constant="true"/>
</listOfReactants>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<apply>
<plus/>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Td </ci>
</apply>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Ts </ci>
</apply>
</apply>
<apply>
<ln/>
<cn type="integer"> 2 </cn>
</apply>
<ci> SigC_a </ci>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_40" id="v4" reversible="true" fast="false">
<listOfReactants>
<speciesReference metaid="metaid_39" species="SigC" stoichiometry="1" constant="true"/>
</listOfReactants>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<apply>
<plus/>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Td </ci>
</apply>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Ts </ci>
</apply>
</apply>
<apply>
<ln/>
<cn type="integer"> 2 </cn>
</apply>
<ci> SigC </ci>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_43" id="v5" name="v5" reversible="true" fast="false">
<listOfProducts>
<speciesReference metaid="metaid_41" species="SigC" stoichiometry="1" constant="true"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference metaid="metaid_42" species="SigC_a"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<divide/>
<apply>
<times/>
<ci> Vs </ci>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_s </ci>
</apply>
<ci> h_theta_s </ci>
</apply>
</apply>
<apply>
<plus/>
<cn type="integer"> 1 </cn>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_s </ci>
</apply>
<ci> h_theta_s </ci>
</apply>
<apply>
<times/>
<ci> delcc </ci>
<apply>
<power/>
<apply>
<divide/>
<ci> SigC_a </ci>
<ci> Kss </ci>
</apply>
<ci> hss </ci>
</apply>
</apply>
<apply>
<times/>
<ci> delcc </ci>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_s </ci>
</apply>
<ci> h_theta_s </ci>
</apply>
<apply>
<power/>
<apply>
<divide/>
<ci> SigC_a </ci>
<ci> Kss </ci>
</apply>
<ci> hss </ci>
</apply>
</apply>
</apply>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_45" id="v6" reversible="true" fast="false">
<listOfReactants>
<speciesReference metaid="metaid_44" species="PsbA1" stoichiometry="1" constant="true"/>
</listOfReactants>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<apply>
<plus/>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Td </ci>
</apply>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Ty </ci>
</apply>
</apply>
<apply>
<ln/>
<cn type="integer"> 2 </cn>
</apply>
<ci> PsbA1 </ci>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_48" id="v7" name="v7" reversible="true" fast="false">
<listOfProducts>
<speciesReference metaid="metaid_46" species="PsbA1" stoichiometry="1" constant="true"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference metaid="metaid_47" species="SigC_a"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<divide/>
<apply>
<times/>
<ci> Vp </ci>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_p </ci>
</apply>
<ci> h_theta_p </ci>
</apply>
</apply>
<apply>
<plus/>
<cn type="integer"> 1 </cn>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_p </ci>
</apply>
<ci> h_theta_p </ci>
</apply>
<apply>
<times/>
<ci> delcp </ci>
<apply>
<power/>
<apply>
<divide/>
<ci> SigC_a </ci>
<ci> Ksp </ci>
</apply>
<ci> hsp </ci>
</apply>
</apply>
<apply>
<times/>
<ci> delcp </ci>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_p </ci>
</apply>
<ci> h_theta_p </ci>
</apply>
<apply>
<power/>
<apply>
<divide/>
<ci> SigC_a </ci>
<ci> Ksp </ci>
</apply>
<ci> hsp </ci>
</apply>
</apply>
</apply>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_51" id="v8" name="v8" reversible="true" fast="false">
<listOfProducts>
<speciesReference metaid="metaid_49" species="PsbA1mut" stoichiometry="1" constant="true"/>
</listOfProducts>
<listOfModifiers>
<modifierSpeciesReference metaid="metaid_50" species="SigC_a"/>
</listOfModifiers>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<divide/>
<apply>
<times/>
<ci> Vp </ci>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_p </ci>
</apply>
<ci> h_theta_p </ci>
</apply>
</apply>
<apply>
<plus/>
<cn type="integer"> 1 </cn>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_p </ci>
</apply>
<ci> h_theta_p </ci>
</apply>
<apply>
<times/>
<cn type="integer"> 0 </cn>
<apply>
<power/>
<apply>
<divide/>
<ci> SigC_a </ci>
<ci> Ksp </ci>
</apply>
<ci> hsp </ci>
</apply>
</apply>
<apply>
<times/>
<cn type="integer"> 0 </cn>
<apply>
<power/>
<apply>
<divide/>
<ci> theta </ci>
<ci> K_theta_p </ci>
</apply>
<ci> h_theta_p </ci>
</apply>
<apply>
<power/>
<apply>
<divide/>
<ci> SigC_a </ci>
<ci> Ksp </ci>
</apply>
<ci> hsp </ci>
</apply>
</apply>
</apply>
</apply>
</math>
</kineticLaw>
</reaction>
<reaction metaid="metaid_53" id="v9" reversible="true" fast="false">
<listOfReactants>
<speciesReference metaid="metaid_52" species="PsbA1mut" stoichiometry="1" constant="true"/>
</listOfReactants>
<kineticLaw>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<times/>
<apply>
<plus/>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Td </ci>
</apply>
<apply>
<divide/>
<cn type="integer"> 1 </cn>
<ci> Ty </ci>
</apply>
</apply>
<apply>
<ln/>
<cn type="integer"> 2 </cn>
</apply>
<ci> PsbA1mut </ci>
</apply>
</math>
</kineticLaw>
</reaction>
</listOfReactions>
</model>
</sbml>