Assay: _A_080-LDA-Ref-R Short Name: 080-LDA-Ref-R Assay Class: DRY Assay Type: R Title: Ponovljena LDA na podatkih MA, ki so poravnani glede na referencne vzorce Description: Ponovljene analize iz assay 065, vendar so podatki samo poravnani glede na mediane referenčnih vzorcev za MA. Analyst: AB Phenodata: phenodata_20190219.tsv Featuredata: Data: ../_A_30-anotacija-eset-Stat/output/UM-med-ann-eset.Rdata Markers: ../_A_049-produktivnost-HL-MTX-Stat/input/Marker_LIST_Andrej.txt Selected markers: ./input/Marker_LIST_IZBOR_napovedno_modeliranje_1.txt Top22: ./input/Top22.tsv Annotation: # in the study description Output: Tables with selected markers in folder ./ouptut Reports: produktivnost4*.pdf files; exclude correlated and keep the most expressed genes. Delete genes with low expressed genes in reference samples.