locally and globally installed from https://gitlab.com/ezlab/busco.git with dependencies: tblastn from NCBI-blast v.2.6.0+ makeblastdb from NCBI-blast v.2.6.0+ hmmsearch from python2 anaconda Rscript augustus http://bioinf.uni-greifswald.de/augustus/binaries/augustus-3.3.1.tar.gz samtools https://github.com/samtools/samtools/releases/download/1.8/samtools-1.8.tar.bz2 bcftools https://github.com/samtools/bcftools/releases/download/1.8/bcftools-1.8.tar.bz2 htslib https://github.com/samtools/htslib/releases/download/1.8/htslib-1.8.tar.bz2 bamtools git://github.com/pezmaster31/bamtools.git zlib http://www.zlib.net/zlib-1.2.11.tar.gz boost http://sourceforge.net/projects/boost/files/boost/1.60.0/boost_1_60_0.tar.gz pigz 2.3.1 faidx https://dx.doi.org/10.7287/peerj.preprints.970v1