{"text_format":"2","workbook":"xlsx","n_sheets":1,"sheets":["primary_assembly_metadata"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":0,"defined_names":1,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900"}

{"sheet":"primary_assembly_metadata","index":0,"n_rows":111,"n_cols":9,"rows_kept":111,"cut":false,"hidden":false,"merged":[[0,0,0,8]]}
["# primary potato transcriptome assemblies"]
["# Software used:\n# Trinity v.r2013-02-25\n# Velvet in conjunction with Oases v. 1.2.10\n# SPAdes v.3.11.1 \n# CLC Genomics Workbench (8.5.4 - 10.0.1)"]
["Assembly_name","Potato genotype/cultivar","Input data type (Illumina, SOLiD, both)","Assembler","Assembler version","k-mer length (word size)","Bubble size","USEin_evigene","comments"]
["CLCdnDe8.fasta","Desiree","SOLiD","CLC de-novo",9.1,24,50,1,"-"]
["CLCdnDe1.fasta","Desiree","SOLiD","CLC de-novo (transcript discovery as reference)","10.0.1",24,50,1,"-"]
["VdnDe10.fasta","Desiree","SOLiD","velvet/oasis","v. 1.2.10",43,"Default",1,"-"]
["VdnDe8.fasta","Desiree","SOLiD","velvet/oasis","v. 1.2.10",23,"Default",1,"-"]
["VdnDe9.fasta","Desiree","SOLiD","velvet/oasis","v. 1.2.10",33,"Default",1,"-"]
["CLCdnDe10.fasta","Desiree","Illumina","CLC de-novo",9.1,23,85,1,"-"]
["CLCdnDe11.fasta","Desiree","Illumina","CLC de-novo",9.1,33,85,1,"-"]
["CLCdnDe12.fasta","Desiree","Illumina","CLC de-novo",9.1,43,85,1,"-"]
["CLCdnDe13.fasta","Desiree","Illumina","CLC de-novo",9.1,53,85,1,"-"]
["CLCdnDe14.fasta","Desiree","Illumina","CLC de-novo",9.1,63,85,1,"-"]
["CLCdnDe9.fasta","Desiree","Illumina","CLC de-novo",9.1,21,85,1,"-"]
["CLCdnDe2.fasta","Desiree","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",21,85,1,"-"]
["CLCdnDe3.fasta","Desiree","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",23,85,1,"-"]
["CLCdnDe4.fasta","Desiree","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",33,85,1,"-"]
["CLCdnDe5.fasta","Desiree","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",43,85,1,"-"]
["CLCdnDe6.fasta","Desiree","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",53,85,1,"-"]
["CLCdnDe7.fasta","Desiree","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",63,85,1,"-"]
["TDe.fasta","Desiree","Illumina","Trinity","v.r2013-02-25",25,"NA",1,"-"]
["VdnDe1.fasta","Desiree","Illumina","velvet/oasis","v. 1.2.10",23,"Default",1,"-"]
["VdnDe2.fasta","Desiree","Illumina","velvet/oasis","v. 1.2.10",33,"Default",1,"-"]
["VdnDe3.fasta","Desiree","Illumina","velvet/oasis","v. 1.2.10",43,"Default",1,"-"]
["VdnDe4.fasta","Desiree","Illumina","velvet/oasis","v. 1.2.10",53,"Default",1,"-"]
["VdnDe5.fasta","Desiree","Illumina","velvet/oasis","v. 1.2.10",63,"Default",1,"-"]
["VdnDe6.fasta","Desiree","Illumina","velvet/oasis","v. 1.2.10",73,"Default",1,"-"]
["VdnDe7.fasta","Desiree","Illumina","velvet/oasis","v. 1.2.10",83,"Default",1,"-"]
["CLCdnPW1.fasta","PW363","SOLiD","CLC de-novo","8.5.4",24,50,1,"-"]
["CLCdnPW2.fasta","PW363","SOLiD","CLC de-novo (transcript discovery as reference)",9.1,24,50,1,"-"]
["VdnPW10.fasta","PW363","SOLiD","velvet/oasis","v. 1.2.10",43,"Default",1,"-"]
["VdnPW8.fasta","PW363","SOLiD","velvet/oasis","v. 1.2.10",23,"Default",1,"-"]
["VdnPW9.fasta","PW363","SOLiD","velvet/oasis","v. 1.2.10",33,"Default",1,"-"]
["CLCdnPW10.fasta","PW363","Illumina","CLC de-novo","8.5.4",24,65,1,"-"]
["CLCdnPW11.fasta","PW363","Illumina","CLC de-novo","8.5.4",24,85,1,"-"]
["CLCdnPW12.fasta","PW363","Illumina","CLC de-novo","8.5.4",45,50,1,"-"]
["CLCdnPW13.fasta","PW363","Illumina","CLC de-novo","8.5.4",21,50,1,"-"]
["CLCdnPW14.fasta","PW363","Illumina","CLC de-novo","8.5.4",45,65,1,"-"]
["CLCdnPW15.fasta","PW363","Illumina","CLC de-novo","8.5.4",45,85,1,"-"]
["CLCdnPW16.fasta","PW363","Illumina","CLC de-novo","8.5.4",50,50,1,"-"]
["CLCdnPW17.fasta","PW363","Illumina","CLC de-novo","8.5.4",50,65,1,"-"]
["CLCdnPW18.fasta","PW363","Illumina","CLC de-novo","8.5.4",50,85,1,"-"]
["CLCdnPW19.fasta","PW363","Illumina","CLC de-novo","8.5.4",55,50,1,"-"]
["CLCdnPW20.fasta","PW363","Illumina","CLC de-novo","8.5.4",55,65,1,"-"]
["CLCdnPW21.fasta","PW363","Illumina","CLC de-novo","8.5.4",55,85,1,"-"]
["CLCdnPW22.fasta","PW363","Illumina","CLC de-novo","8.5.4",23,50,1,"-"]
["CLCdnPW23.fasta","PW363","Illumina","CLC de-novo","8.5.4",23,65,1,"-"]
["CLCdnPW24.fasta","PW363","Illumina","CLC de-novo","8.5.4",21,65,1,"-"]
["CLCdnPW25.fasta","PW363","Illumina","CLC de-novo","8.5.4",23,85,1,"-"]
["CLCdnPW26.fasta","PW363","Illumina","CLC de-novo","8.5.4",33,50,1,"-"]
["CLCdnPW27.fasta","PW363","Illumina","CLC de-novo","8.5.4",33,65,1,"-"]
["CLCdnPW28.fasta","PW363","Illumina","CLC de-novo","8.5.4",33,85,1,"-"]
["CLCdnPW29.fasta","PW363","Illumina","CLC de-novo","8.5.4",43,50,1,"-"]
["CLCdnPW3.fasta","PW363","Illumina","CLC de-novo","8.5.4",35,50,1,"-"]
["CLCdnPW30.fasta","PW363","Illumina","CLC de-novo","8.5.4",43,65,1,"-"]
["CLCdnPW31.fasta","PW363","Illumina","CLC de-novo","8.5.4",43,85,1,"-"]
["CLCdnPW32.fasta","PW363","Illumina","CLC de-novo","8.5.4",53,50,1,"-"]
["CLCdnPW33.fasta","PW363","Illumina","CLC de-novo","8.5.4",53,65,1,"-"]
["CLCdnPW34.fasta","PW363","Illumina","CLC de-novo","8.5.4",53,85,1,"-"]
["CLCdnPW35.fasta","PW363","Illumina","CLC de-novo","8.5.4",21,85,1,"-"]
["CLCdnPW36.fasta","PW363","Illumina","CLC de-novo","8.5.4",63,50,1,"-"]
["CLCdnPW37.fasta","PW363","Illumina","CLC de-novo","8.5.4",63,65,1,"-"]
["CLCdnPW38.fasta","PW363","Illumina","CLC de-novo","8.5.4",63,85,1,"-"]
["CLCdnPW39.fasta","PW363","Illumina","CLC de-novo","8.5.4",25,50,1,"-"]
["CLCdnPW4.fasta","PW363","Illumina","CLC de-novo","8.5.4",35,65,1,"-"]
["CLCdnPW40.fasta","PW363","Illumina","CLC de-novo","8.5.4",25,65,1,"-"]
["CLCdnPW41.fasta","PW363","Illumina","CLC de-novo","8.5.4",25,85,1,"-"]
["CLCdnPW42.fasta","PW363","Illumina","CLC de-novo","8.5.4",30,50,1,"-"]
["CLCdnPW43.fasta","PW363","Illumina","CLC de-novo","8.5.4",30,65,1,"-"]
["CLCdnPW44.fasta","PW363","Illumina","CLC de-novo","8.5.4",30,85,1,"-"]
["CLCdnPW5.fasta","PW363","Illumina","CLC de-novo","8.5.4",35,85,1,"-"]
["CLCdnPW6.fasta","PW363","Illumina","CLC de-novo","8.5.4",40,50,1,"-"]
["CLCdnPW7.fasta","PW363","Illumina","CLC de-novo","8.5.4",40,65,1,"-"]
["CLCdnPW8.fasta","PW363","Illumina","CLC de-novo","8.5.4",40,85,1,"-"]
["CLCdnPW9.fasta","PW363","Illumina","CLC de-novo","8.5.4",24,50,1,"-"]
["CLCdnPW45.fasta","PW363","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",21,85,1,"-"]
["CLCdnPW46.fasta","PW363","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",23,85,1,"-"]
["CLCdnPW47.fasta","PW363","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",33,85,1,"-"]
["CLCdnPW48.fasta","PW363","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",43,85,1,"-"]
["CLCdnPW49.fasta","PW363","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",53,85,1,"-"]
["CLCdnPW50.fasta","PW363","Illumina","CLC de-novo (transcript discovery as reference)","10.0.1",63,85,1,"-"]
["SdnPW1.fasta","PW363","Illumina","rnaSPAdes","3.11.1",43,"Default",1,"-"]
["TPW.fasta","PW363","Illumina","Trinity","v.r2013-02-25",25,"NA",1,"-"]
["VdnPW1.fasta","PW363","Illumina","velvet/oasis","v. 1.2.10",23,"Default",1,"-"]
["VdnPW2.fasta","PW363","Illumina","velvet/oasis","v. 1.2.10",33,"Default",1,"-"]
["VdnPW3.fasta","PW363","Illumina","velvet/oasis","v. 1.2.10",43,"Default",1,"-"]
["VdnPW4.fasta","PW363","Illumina","velvet/oasis","v. 1.2.10",53,"Default",1,"-"]
["VdnPW5.fasta","PW363","Illumina","velvet/oasis","v. 1.2.10",63,"Default",1,"-"]
["VdnPW6.fasta","PW363","Illumina","velvet/oasis","v. 1.2.10",73,"Default",1,"-"]
["VdnPW7.fasta","PW363","Illumina","velvet/oasis","v. 1.2.10",83,"Default",1,"-"]
["PBdnRY1.fasta","Rywal","PacBio Isoseq","ToFu cDNA cupcake pipeline",2017,"NA","NA",1,"-"]
["CLCdnRY1.fasta","Rywal","Illumina","CLC de-novo",9.1,21,85,1,"-"]
["CLCdnRY2.fasta","Rywal","Illumina","CLC de-novo",9.1,23,85,1,"-"]
["CLCdnRY3.fasta","Rywal","Illumina","CLC de-novo",9.1,33,85,1,"-"]
["CLCdnRY4.fasta","Rywal","Illumina","CLC de-novo",9.1,43,85,1,"-"]
["CLCdnRY5.fasta","Rywal","Illumina","CLC de-novo",9.1,53,85,1,"-"]
["CLCdnRY6.fasta","Rywal","Illumina","CLC de-novo",9.1,63,85,1,"-"]
["CLCdnRY10.fasta","Rywal","Illumina","CLC de-novo (transcript discovery as reference)","10.1.1",43,85,1,"-"]
["CLCdnRY11.fasta","Rywal","Illumina","CLC de-novo (transcript discovery as reference)","10.1.1",53,85,1,"-"]
["CLCdnRY12.fasta","Rywal","Illumina","CLC de-novo (transcript discovery as reference)","10.1.1",63,85,1,"-"]
["CLCdnRY7.fasta","Rywal","Illumina","CLC de-novo (transcript discovery as reference)","10.1.1",23,85,1,"-"]
["CLCdnRY8.fasta","Rywal","Illumina","CLC de-novo (transcript discovery as reference)","10.1.1",21,85,1,"-"]
["CLCdnRY9.fasta","Rywal","Illumina","CLC de-novo (transcript discovery as reference)","10.1.1",33,85,1,"-"]
["SdnRY1.fasta","Rywal","Illumina","rnaSPAdes","3.11.1",43,"Default",1,"-"]
["VdnRY1.fasta","Rywal","Illumina","velvet/oasis","v. 1.2.10",23,"Default",1,"-"]
["VdnRY2.fasta","Rywal","Illumina","velvet/oasis","v. 1.2.10",33,"Default",1,"-"]
["VdnRY3.fasta","Rywal","Illumina","velvet/oasis","v. 1.2.10",43,"Default",1,"-"]
["VdnRY4.fasta","Rywal","Illumina","velvet/oasis","v. 1.2.10",53,"Default",1,"-"]
["VdnRY5.fasta","Rywal","Illumina","velvet/oasis","v. 1.2.10",63,"Default",1,"-"]
["VdnRY6.fasta","Rywal","Illumina","velvet/oasis","v. 1.2.10",73,"Default",1,"-"]
["VdnRY7.fasta","Rywal","Illumina","velvet/oasis","v. 1.2.10",83,"Default",1,"-"]