Reference sequence (1): VdnRY5_12456 Identities normalised by reference length. Colored by: identity |
cov pid 1 [ . . . . : . . . . 1 . . . . : 150
1 VdnRY5_12456 100.0% 100.0% ATGGGATCATCTGGGTTCTTCATAATCTGCGTTCTTCATTCGCTAATAGCGAGTACTAGTGGCGTTTTGATAATGTTTTATCTGAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
2 Sotub07g019550.1.1 62.5% 57.9% ATGGGATCATCTGGGTTCTTCATAATCTGCGTTCTTCATTCGCTAATAGCGAGTACTAGTGGTGTTTTGATAATGTTTTATCTGAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACACCACAT
3 VdnPW4_91431 62.5% 58.2% ATGGGATCATCTGGGTTCTTCATAATCTGCGTTCTTCATTCGCTAATAGCGAGTACTAGTGGTGTTTTGATAATGTTTTATCTGAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
4 VdnDe7_18849 62.5% 58.3% ATGGGATCATCTGGGTTCTTCATAATCTGCGTTCTTCATTCGCTAATAGCGAGTACTAGTGGCGTTTTGATAATGTTTTATCTGAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
5 CLCdnRY10_37978 52.2% 47.8% ------------------------------------------------------------------------ATGTTTTATCTGAACGAAGTATCTGTTCTCGGACATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
6 CLCdnRY6_59193 62.5% 58.3% ATGGGATCATCTGGGTTCTTCATAATCTGCGTTCTTCATTCGCTAATAGCGAGTACTAGTGGCGTTTTGATAATGTTTTATCTGAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
7 CLCdnRY8_30198 62.5% 58.2% ATGGGATCATCTGGGTTCTTCATAATCTGCGTTCTTCATTCGCTAATAGCGAGTACTAGTGGTGTTTTGATAATGTTTTATCTGAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
8 VdnRY4_25747 51.7% 47.3% ------------------------------------------------------------------------ATGTTTTATCTGAACGAAGTATCTGTTCTCGGACATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
9 VdnPW3_91379 56.5% 55.9% ATGGGATCATCTGGGTTCTTCATAATCTGCGCTCTTCACTCGCTAATAGCGAGTACTAGTGGTCTTTTGATAATGTTTTATCTGAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
10 VdnDe1_113125 56.0% 49.0% ---------------------------------------------ACCGAGAACAGATACTTCGTTCAGATAAAACATTATCAAAACGAAGTATCTGTTCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACAT
clustal *:. :*****:.********************:**************************************.******
cov pid 151 . . . . 2 . . . . : . . . . 3 300
1 VdnRY5_12456 100.0% 100.0% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
2 Sotub07g019550.1.1 62.5% 57.9% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
3 VdnPW4_91431 62.5% 58.2% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
4 VdnDe7_18849 62.5% 58.3% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
5 CLCdnRY10_37978 52.2% 47.8% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
6 CLCdnRY6_59193 62.5% 58.3% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
7 CLCdnRY8_30198 62.5% 58.2% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
8 VdnRY4_25747 51.7% 47.3% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
9 VdnPW3_91379 56.5% 55.9% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
10 VdnDe1_113125 56.0% 49.0% GATCAATTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCG
clustal ******************************************************************************************************************************************************
cov pid 301 . . . . : . . . . 4 . . . . : 450
1 VdnRY5_12456 100.0% 100.0% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGCTCGGTCATGGAATTGAAACAGCGAGAAAGCTACTGGGATCAACCCCACATGATCAA
2 Sotub07g019550.1.1 62.5% 57.9% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGAGATTTTGTTCTTGCACTTTCTTGGGTGTTTTTTCTTGTTAGTTCATGGAGGGACAAGTATGATTAG---------------
3 VdnPW4_91431 62.5% 58.2% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGGTGTTTTTTCTTGTTAGTTCATGGAGGGACAAGTATGATTAG---------------
4 VdnDe7_18849 62.5% 58.3% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGATGTTTTTTCTTGTTAGTTCATGGAGGGACAAGTATGATTAG---------------
5 CLCdnRY10_37978 52.2% 47.8% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGGTGTTTTTTCTTGTTAGTTCATGGAGGGACAAGTATGATTAG---------------
6 CLCdnRY6_59193 62.5% 58.3% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGATGTTTTTTCTTGTTAGTTCATGGAGGGACAAGTATGATTAG---------------
7 CLCdnRY8_30198 62.5% 58.2% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGGTGTTTTTTCTTGTTAGTTCATGGAGGGACAAGTATGATTAG---------------
8 VdnRY4_25747 51.7% 47.3% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGATGTTTTTTCTGTGTTTTTTCTTGTTAGTTCATGGAGGG------------------
9 VdnPW3_91379 56.5% 55.9% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGG---------------------------------------------------------
10 VdnDe1_113125 56.0% 49.0% TTATGGAGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGATGTTTTTTCTTGTTAGTTCATGGAGGGACAAGTATGATTAG---------------
clustal ********************************************************************:************************
cov pid 451 . . . . 5 . . . . : . . . . 6 600
1 VdnRY5_12456 100.0% 100.0% TTGTTGATAAAAACTTCTGATTCATTTGTTGGATTGCTGTTATGTGTAATTGGGTTATTGTTATTCATGGTGTCGTTTGTTAAGGACAGGGAGTTTCAGAGCTTTTTCGCTAAAGGTTGTATCTTTCTTCATGTATCAATGGCGTTATGG
2 Sotub07g019550.1.1 62.5% 57.9% ------------------------------------------------------------------------------------------------------------------------------------------------------
3 VdnPW4_91431 62.5% 58.2% ------------------------------------------------------------------------------------------------------------------------------------------------------
4 VdnDe7_18849 62.5% 58.3% ------------------------------------------------------------------------------------------------------------------------------------------------------
5 CLCdnRY10_37978 52.2% 47.8% ------------------------------------------------------------------------------------------------------------------------------------------------------
6 CLCdnRY6_59193 62.5% 58.3% ------------------------------------------------------------------------------------------------------------------------------------------------------
7 CLCdnRY8_30198 62.5% 58.2% ------------------------------------------------------------------------------------------------------------------------------------------------------
8 VdnRY4_25747 51.7% 47.3% ------------------------------------------------------------------------------------------------------------------------------------------------------
9 VdnPW3_91379 56.5% 55.9% ------------------------------------------------------------------------------------------------------------------------------------------------------
10 VdnDe1_113125 56.0% 49.0% ------------------------------------------------------------------------------------------------------------------------------------------------------
clustal
cov pid 601 . . . . : . . . . ] 696
1 VdnRY5_12456 100.0% 100.0% AGAGTTTATTTTGAAAGGAAAGTTGAGGATTTAGCTTATGATTGGCCAAGACAACTTGTTGGTGATTTTGTTCTTGCACTTTCTTGGATGTTTTTT
2 Sotub07g019550.1.1 62.5% 57.9% ------------------------------------------------------------------------------------------------
3 VdnPW4_91431 62.5% 58.2% ------------------------------------------------------------------------------------------------
4 VdnDe7_18849 62.5% 58.3% ------------------------------------------------------------------------------------------------
5 CLCdnRY10_37978 52.2% 47.8% ------------------------------------------------------------------------------------------------
6 CLCdnRY6_59193 62.5% 58.3% ------------------------------------------------------------------------------------------------
7 CLCdnRY8_30198 62.5% 58.2% ------------------------------------------------------------------------------------------------
8 VdnRY4_25747 51.7% 47.3% ------------------------------------------------------------------------------------------------
9 VdnPW3_91379 56.5% 55.9% ------------------------------------------------------------------------------------------------
10 VdnDe1_113125 56.0% 49.0% ------------------------------------------------------------------------------------------------
clustal
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