Thu Oct 10 21:47:37 CEST 2019

Using: selected_4_wc_aa/stPanTr_028778.txt and 5cv.cds.fasta

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get sequences

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ClustalOmega

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mview

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tree



 CLUSTAL 2.1 Multiple Sequence Alignments


Sequence format is Pearson
Sequence 1: Sotub01g024670.1.1   873 bp
Sequence 2: CLCdnRY1_27548       873 bp
Sequence 3: VdnPW2_91756         873 bp
Sequence 4: CLCdnDe4_49240       873 bp
Sequence 5: VdnRY4_11333         873 bp
Sequence 6: CLCdnPW32_6955       873 bp
Sequence 7: CLCdnPW34_6917       873 bp
Sequence 8: CLCdnPW36_59536      873 bp
Sequence 9: CLCdnPW50_7647       873 bp
Sequence 10: VdnPW1_117761        873 bp
Sequence 11: VdnPW3_63321         873 bp
Sequence 12: VdnDe2_152369        873 bp
Sequence 13: VdnDe3_126734        873 bp
Sequence 14: VdnDe4_109815        873 bp
Sequence 15: VdnDe4_109816        873 bp

 WARNING: sequences 7 and 8 are non-overlapping

Phylogenetic tree file created:   [./cds_ClustalOmega_selected_4_wc_aa_150_off_5_28/stPanTr_028778.txt.ph]

Results at ./cds_ClustalOmega_selected_4_wc_aa_150_off_5_28

Thu Oct 10 21:48:00 CEST 2019